CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_THEP1 (Acetylglutamate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=argB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.394e-40
Identity = 83/181 (45.86%), Postives = 117/181 (64.64%), Query Frame = 2
Query:  293 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            V++L E+LP+I++F GKT V+K+GG+AMK   ++N                 +P++VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+VG+V +V+P ++  L+ + +IPVIA V   E G SYNINADT
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADT 183          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_THEMA (Acetylglutamate kinase OS=Thermotoga maritima GN=argB PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.394e-40
Identity = 83/181 (45.86%), Postives = 117/181 (64.64%), Query Frame = 2
Query:  293 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            V++L E+LP+I++F GKT V+K+GG+AMK   ++N                 +P++VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+VG+V +V+P ++  L+ + +IPVIA V   E G SYNINADT
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADT 183          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESHD (Acetylglutamate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=argB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.394e-40
Identity = 97/200 (48.50%), Postives = 122/200 (61.00%), Query Frame = 2
Query:  275 TPAEFRVD---ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSP----NSD------KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            TP +  +D   +L E+LP+IQKF GKT+V+KYGG AM    + +                 RPV+VHGGGPEIN  L R G E  F  GLRVTD  TMEI SMVLVG++N  ++SL+N+ G  AVGLSG D +L  A   P    NS        LGFVGE+ ++ P ++  LV  G+IPVI+ VA  E G+SYNINADT
Sbjct:    2 TPLDKGLDKARVLIEALPYIQKFAGKTVVIKYGGHAML---EQDLKEKVMLDILLLHSVGIRPVVVHGGGPEINSMLTRVGKESHFVRGLRVTDKETMEIASMVLVGKLNTEIISLLNRFGGRAVGLSGKDAQLLQAVKKPMQFQNSQGELEDVDLGFVGEIEQIRPEIVTSLVEQGYIPVISPVAGGEDGESYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_THEPX (Acetylglutamate kinase OS=Thermoanaerobacter sp. (strain X514) GN=argB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.790e-40
Identity = 85/182 (46.70%), Postives = 117/182 (64.29%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +  +L E+LP+I+KF G T+V+KYGG+AM      N                  P++VHGGGPEIN  L+R GIE  F +GLRVTD  TMEIV MVL GR+NK +VSLIN+ G  A+G+SG DGRL  A    ++  +G+VG++  V+  VI  ++  G+IPVIA  +  + G++YN+NADT
Sbjct:   13 KAQVLIEALPYIKKFSGTTVVIKYGGSAMLDC---NLKRMVMQDIVLMKFVGLNPIVVHGGGPEINKMLERLGIESKFVNGLRVTDEATMEIVEMVLTGRINKEIVSLINELGGQAIGVSGKDGRLLKAEKDTSNGDIGYVGKIVDVNIDVITMMLEKGYIPVIAPTSFGDDGKTYNVNADT 191          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_KOSOT (Acetylglutamate kinase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=argB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.790e-40
Identity = 86/182 (47.25%), Postives = 115/182 (63.19%), Query Frame = 2
Query:  293 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            V +L E+LP+I++F GKT V+K+GG+AMK    +N                  PV+VHGGG EI+  + + GIEPVF++G R+TD  TMEIV MVLVG+VNK +V  IN  G  A+G+ G DG L  A        +G+VG+V +VD T+I+ L+  G+IPVIA +   E G SYNINAD V
Sbjct:    6 VQVLLEALPYIKEFHGKTFVIKFGGSAMK---NENAKEAFIKDLVLLKYTGINPVIVHGGGSEISSLMNQLGIEPVFKNGYRITDEKTMEIVEMVLVGKVNKDIVMNINLHGGKAIGVCGKDGELLLAEKETKYGDIGYVGKVKKVDTTLIKGLLVEGYIPVIAPIGFGEDGTSYNINADIV 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESHY (Acetylglutamate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=argB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.562e-40
Identity = 98/200 (49.00%), Postives = 121/200 (60.50%), Query Frame = 2
Query:  275 TPAEFRVD---ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSP----NSD------KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            TP +  +D   +L E+LP+IQKF GKT+V+KYGG AM      +                 RPV+VHGGGPEIN  L R G E  F  GLRVTD  TMEI SMVLVG++N  ++SL+N+ G  AVGLSG D +L  A   P    NS        LGFVGE+ +V P ++  LV  G+IPVI+ VA  E G+SYNINADT
Sbjct:    2 TPLDKGLDKARVLIEALPYIQKFTGKTVVIKYGGHAMLDQ---DLKEKVMLDILLLHSVGIRPVVVHGGGPEINSMLTRVGKESHFVRGLRVTDKETMEIASMVLVGKLNTEIISLLNRFGGKAVGLSGKDAQLLQAVKKPMKFENSQGELEDVDLGFVGEIEQVRPEIVISLVEQGYIPVISPVAGGEDGESYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PELTS (Acetylglutamate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=argB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.200e-39
Identity = 94/196 (47.96%), Postives = 118/196 (60.20%), Query Frame = 2
Query:  275 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF----------TARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            TP E +  +L E+LP+I+KF GKTIV+KYGG AM     D+                  PV+VHGGGPEI   LKR G +  F  GLRVTD  TMEIV MVLVG++NK +VS IN+ G  AVGLSG D  LF          T      +  +GFVGE++RV+P ++  ++  G+IPVIA VA    G+SYNINAD
Sbjct:    3 TPWE-KAAVLVEALPYIKKFYGKTIVIKYGGHAMLD---DSLKEAVLTDAVLMKYVGMHPVIVHGGGPEITEMLKRVGKDSRFVGGLRVTDGETMEIVEMVLVGKINKGIVSRINRIGGLAVGLSGKDAGLFQAVKKYRKVRTPEGREETADIGFVGEISRVNPQIVSTVIAEGYIPVIAPVAVGPEGESYNINAD 194          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_HELMI (Acetylglutamate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=argB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.753e-39
Identity = 89/192 (46.35%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +  IL E+LP+I+KF GKT+V+KYGGAAM     D                   PV+VHGGGPEIN  L R G++  F  GLRVTD +TME+V MVL G+VNK +V+LI + G  AVGL G DG L  A+      K          +GFVG+V +++P ++  L + G+IPVIA +   E G+SYNINADT
Sbjct:    7 KAGILVEALPYIKKFSGKTVVIKYGGAAMV---NDQLKEAVIMDVILMKLVGIHPVVVHGGGPEINGMLDRLGLKSHFIQGLRVTDESTMEVVEMVLAGKVNKEIVALIQRFGGKAVGLCGKDGGLIQAKKRFELVKNEGGARVPTDIGFVGDVVKIEPGLVRELADRGYIPVIAPIGVGEKGESYNINADT 195          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_METCA (Acetylglutamate kinase OS=Methylococcus capsulatus GN=argB PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.360e-39
Identity = 92/189 (48.68%), Postives = 115/189 (60.85%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +L+E+LP+I++F+G+TIVVKYGG AM  +   N                  PV+VHGGGP+I   L+R G    F  G+RVTDA TM++V MVL G VNK +V+LIN+ G  AVGLSG DG L  AR          +P    LG VGEVA +DP V++ LVN   IPVIA +   E G SYNINAD V
Sbjct:   18 VLTEALPYIRRFKGRTIVVKYGGNAMIDDHLKNSFARDVVLLKLVGI---NPVVVHGGGPQIGNLLQRLGKTSEFVQGMRVTDAETMDVVEMVLGGLVNKEIVNLINRQGGAAVGLSGKDGDLIRARKIRMSQPLSDAPEIIDLGHVGEVASIDPAVVDMLVNGDFIPVIAPIGVGEDGCSYNINADLV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_GLUDA (Acetylglutamate kinase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=argB PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.360e-39
Identity = 90/202 (44.55%), Postives = 119/202 (58.91%), Query Frame = 2
Query:  260 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +  T   A+ R  +L+++LPF++++ G TIVVKYGG AM  +   N                  PV+VHGGGP+I+  L R  I   F DGLRVTDA  ++++ MVL G+VNK +  LIN+AGA AVG+SG DG L TAR    + +          LGFVGE   +DP V+  L  SG IPV+A V   E G++YNINADT
Sbjct:   17 IVRTMQEAQERAAVLAQALPFLRRYAGDTIVVKYGGHAMVDDSLSNAFGHDIALLKLVGV---NPVIVHGGGPQISAMLTRLQIPSTFVDGLRVTDAAMVDVIEMVLAGKVNKQVAGLINQAGALAVGISGKDGGLITARRLQRTTRDASGQERALDLGFVGEPTHIDPRVLYALSGSGLIPVVAPVGIGEAGETYNINADT 215          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_THEP13.394e-4045.86Acetylglutamate kinase OS=Thermotoga petrophila (s... [more]
ARGB_THEMA3.394e-4045.86Acetylglutamate kinase OS=Thermotoga maritima GN=a... [more]
ARGB_DESHD3.394e-4048.50Acetylglutamate kinase OS=Desulfitobacterium hafni... [more]
ARGB_THEPX5.790e-4046.70Acetylglutamate kinase OS=Thermoanaerobacter sp. (... [more]
ARGB_KOSOT5.790e-4047.25Acetylglutamate kinase OS=Kosmotoga olearia (strai... [more]
ARGB_DESHY7.562e-4049.00Acetylglutamate kinase OS=Desulfitobacterium hafni... [more]
ARGB_PELTS2.200e-3947.96Acetylglutamate kinase OS=Pelotomaculum thermoprop... [more]
ARGB_HELMI3.753e-3946.35Acetylglutamate kinase OS=Heliobacterium modestica... [more]
ARGB_METCA8.360e-3948.68Acetylglutamate kinase OS=Methylococcus capsulatus... [more]
ARGB_GLUDA8.360e-3944.55Acetylglutamate kinase OS=Gluconacetobacter diazot... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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