CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_AKKM8 (Acetylglutamate kinase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=argB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13
Identity = 55/188 (29.26%), Postives = 87/188 (46.28%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLG---FVGEVARVDPTVIEPLVNSGHIPV--IASVAADEFG--QSYNINAD 832
            +  ++  +LP++Q +R KT ++K+GG+AM   +                     PV+VHGGG  I+  +   G+E  F +GLRVT    + IV   L G +N  LV +    G   VG+ G +  +F        D+ G    +GEV  V   + E +  +  + +  I S  A E G  +  N+NAD
Sbjct:   11 QASVIVGALPYLQAYRDKTFLIKFGGSAMDDAR---LVKKLMRDIVLLEVLGFNPVIVHGGGKAISKAMAEAGLEARFVNGLRVTTPEAISIVERTLSGTINPGLVQMFRDYGGKGVGIPGTE--IFVGERIHEKDEQGNPIDIGEVGNVIGCLTERITEALELQITPIVSPLAKELGTHKPLNVNAD 193          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_YERE8 (Acetylglutamate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=argB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13
Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V++HGGG  ++  +K+  +  V ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   T   +P    LG VG+     P +++ L+ + ++P+I+S+   + G   N+NAD
Sbjct:   35 VIMHGGGCLVDDLMKKLALPVVKKNGLRVTPADQIDIITGALAGTANKTLLAWAVKHDINAVGLCLGDGN--TVSVTPLDAALGHVGKAEAGSPALVQTLLAANYMPIISSIGITKDGSLMNVNAD 158          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHISS (Acetylglutamate kinase OS=Shigella sonnei (strain Ss046) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   39 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHIFL (Acetylglutamate kinase OS=Shigella flexneri GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   39 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHIDS (Acetylglutamate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   39 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINTLLENGYLPVVSSIGVTDEGQLMNVNAD 162          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHIBS (Acetylglutamate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   39 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHIB3 (Acetylglutamate kinase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   38 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 161          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHEPA (Acetylglutamate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            ++VHGGG  ++  LK  G+     DGLRVT    + ++   L G  NK+L +   KAG T +G+S  D  +  A+       LG VGEV   D + +E ++  G +P+++S+A  E G+  N+NAD
Sbjct:   48 IMVHGGGCLVDEQLKANGMITEKLDGLRVTPEAQIPVIVGALAGTSNKTLQAAAIKAGVTCLGMSLADAGMMNAK--IKDPLLGLVGEVEPKDASYLEFVLAKGWMPIVSSIAISEQGEMLNVNAD 171          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ECOUT (Acetylglutamate kinase OS=Escherichia coli (strain UTI89 / UPEC) GN=argB PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   39 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ECOSE (Acetylglutamate kinase OS=Escherichia coli (strain SE11) GN=argB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            V+VHGGG  ++  +K   +    ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +   ++LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD
Sbjct:   38 VIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 161          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_AKKM81.216e-1329.26Acetylglutamate kinase OS=Akkermansia muciniphila ... [more]
ARGB_YERE81.588e-1333.33Acetylglutamate kinase OS=Yersinia enterocolitica ... [more]
ARGB_SHISS2.074e-1334.13Acetylglutamate kinase OS=Shigella sonnei (strain ... [more]
ARGB_SHIFL2.074e-1334.13Acetylglutamate kinase OS=Shigella flexneri GN=arg... [more]
ARGB_SHIDS2.074e-1334.13Acetylglutamate kinase OS=Shigella dysenteriae ser... [more]
ARGB_SHIBS2.074e-1334.13Acetylglutamate kinase OS=Shigella boydii serotype... [more]
ARGB_SHIB32.074e-1334.13Acetylglutamate kinase OS=Shigella boydii serotype... [more]
ARGB_SHEPA2.074e-1335.71Acetylglutamate kinase OS=Shewanella pealeana (str... [more]
ARGB_ECOUT2.074e-1334.13Acetylglutamate kinase OS=Escherichia coli (strain... [more]
ARGB_ECOSE2.074e-1334.13Acetylglutamate kinase OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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