CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CLOB8 (Acetylglutamate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=argB PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.825e-37
Identity = 82/183 (44.81%), Postives = 118/183 (64.48%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVA-ADEFGQSYNINADT 835
            R ++L  +LP+IQ++RGK IVVKYGG AM  N+                     P++VHGGGP+I+  L R   +  F +GLR TD  T+E+V MVL G+VNK+LVSLI K G  A+GL GMDG L  A+   + + LG+VGE+ +V+  +++  ++SG+IPV+ SVA  ++  ++YNINADT
Sbjct:    7 RAEVLVHALPYIQRYRGKIIVVKYGGNAMISNE---LRETVINDIILMKCVGIEPIVVHGGGPDISDLLNRLNHKSEFINGLRYTDDITIEVVQMVLGGKVNKNLVSLIEKFGGKAIGLCGMDGSLLKAKKIESDNDLGYVGEITKVNTEILKTTISSGYIPVVGSVALGEDDNKAYNINADT 186          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_NITEC (Acetylglutamate kinase OS=Nitrosomonas eutropha (strain C91) GN=argB PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.022e-36
Identity = 87/191 (45.55%), Postives = 117/191 (61.26%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +V+IL+E+LP+I++F  KTIV+KYGG AM    ++                   PV+VHGGGP+I+  LKR G E VF  G+RVTDA TM+IV M+L G +NK +V+LIN+ G  AVGL+G DG    A+     DK        +G VGE+  +DP++I+ L     IPVIA +   E G+SYNINAD V
Sbjct:   10 KVEILAEALPYIRRFHNKTIVIKYGGNAMT---EEILKQSFAKDVVLLKLVGMNPVIVHGGGPQIDSMLKRVGKEGVFIQGMRVTDAETMDIVEMILGGLINKEIVNLINRHGGQAVGLTGKDGMFIRAKRMLIKDKEDAEKWINIGQVGEIEYIDPSLIKLLDARDFIPVIAPIGVGEEGESYNINADLV 197          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_METB6 (Acetylglutamate kinase OS=Methanoregula boonei (strain 6A8) GN=argB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 89/193 (46.11%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAM-KPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS----------PNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            R D+L E+LP+IQ+F GKTIV+K GG AM  P   +N                 R VLVHGGGPEI   +K  G E VF  GLRVTD  T+EI  MVLVG++NK ++SLI K GA  VGLSG DG +  A+                 LG VGE+  +DP+++  L++  +IPVI+ +A D +G S NINADT
Sbjct:    4 REDVLMEALPYIQQFHGKTIVIKLGGHAMVDPEVLENAIKDAVLLHYVGI----RVVLVHGGGPEITEKMKALGKESVFVGGLRVTDQETLEIAQMVLVGKINKGIISLIAKCGAKGVGLSGSDGNIILAKKMDLQKVNVQGVEQEVDLGHVGEIEWIDPSLLTTLLDRDYIPVISPIAIDRYGGSLNINADT 192          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CLOK5 (Acetylglutamate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=argB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 84/179 (46.93%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            IL+ESLP+IQK+RGKTIVVKYGG+AM   Q                      V+VHGGGP I+ +LK+   E VF DGLR TD  TM++V MVL G+VNK LV LI   G  A+GL G+DG +  A        LG VGE+  ++  +I   +++G+IPVI+S+A  +  ++YNINADT
Sbjct:    9 ILAESLPYIQKYRGKTIVVKYGGSAMLDEQLKKYVINDLVLMKCVGINL---VVVHGGGPFISSYLKKLNKESVFIDGLRYTDEETMDVVQMVLSGKVNKDLVKLIQSYGGKALGLCGIDGAMIKAEKISKGVDLGKVGEITDINTEIIISSIDNGYIPVISSIALGDDNETYNINADT 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CLOK1 (Acetylglutamate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=argB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 84/179 (46.93%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            IL+ESLP+IQK+RGKTIVVKYGG+AM   Q                      V+VHGGGP I+ +LK+   E VF DGLR TD  TM++V MVL G+VNK LV LI   G  A+GL G+DG +  A        LG VGE+  ++  +I   +++G+IPVI+S+A  +  ++YNINADT
Sbjct:    9 ILAESLPYIQKYRGKTIVVKYGGSAMLDEQLKKYVINDLVLMKCVGINL---VVVHGGGPFISSYLKKLNKESVFIDGLRYTDEETMDVVQMVLSGKVNKDLVKLIQSYGGKALGLCGIDGAMIKAEKISKGVDLGKVGEITDINTEIIISSIDNGYIPVISSIALGDDNETYNINADT 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CELJU (Acetylglutamate kinase OS=Cellvibrio japonicus (strain Ueda107) GN=argB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 86/192 (44.79%), Postives = 117/192 (60.94%), Query Frame = 2
Query:  296 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++L+E+LP+IQ+F GKT+VVK+GG AM+     N                  PV+VHGGGP+I   L++  I+  F +G+RVTD+ TM++V MVL G VNK +VSLIN+ G  A+GL+G DG+L  A+            +P    +G VGEV  V+  VI+ L+NS  IPVIA +   E G SYNINAD V
Sbjct:   13 NVLTEALPYIQRFTGKTVVVKFGGNAMEGEALQNSFARDIVLMKLVGM---NPVVVHGGGPQIGSLLEKLNIKSEFINGMRVTDSATMDVVEMVLGGTVNKQIVSLINRNGGQAIGLTGKDGQLIRAKKLTVTHKTPEMLAPEILDIGHVGEVQSVNTAVIDMLINSDFIPVIAPIGVGEDGASYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHIL3 (Acetylglutamate kinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=argB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.743e-36
Identity = 88/199 (44.22%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  272 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +T +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    3 ETESEMQARLLAKALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLSKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTVKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_NITEU (Acetylglutamate kinase OS=Nitrosomonas europaea GN=argB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.743e-36
Identity = 87/191 (45.55%), Postives = 116/191 (60.73%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +V+IL+E+LP+I++F  KTIV+KYGG AM    ++                   PV++HGGGP+I+  LKR G E VF  G+RVTDA TM+IV MVL G +NK +V+LIN+ G  AVGL+G DG    A+     DK        +G VGE+  +DP++I  L     IPVIA +   E G+SYNINAD V
Sbjct:   10 KVNILAEALPYIRRFHDKTIVIKYGGNAMI---EEALKQGFARDVVLLKLVGMNPVIIHGGGPQIDHMLKRVGKEGVFIQGMRVTDAETMDIVEMVLGGLINKEIVNLINRHGGQAVGLTGKDGMFIRAKRMLIQDKEKAGEWINIGQVGEIEYIDPSLIALLDTRDFIPVIAPIGVGEDGESYNINADLV 197          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MOOTA (Acetylglutamate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=argB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.743e-36
Identity = 89/199 (44.72%), Postives = 118/199 (59.30%), Query Frame = 2
Query:  269 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK---------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            T +P E +  IL E+LP+I++F GKT+V+KYGG AM   +                    RPV+VHGGGPEI   L R G +  F  G RVTDA TMEIV MVLVG++NK +V+ I++ G  A+GL G DG L  AR      +         LG+VG+V RV+P +IE ++  G+IPV+A +     G+SYNINAD V
Sbjct:    2 TLSPLE-KTGILIEALPYIRQFYGKTVVIKYGGHAMVNCELKKAVMQDAVLMHLVGM---RPVIVHGGGPEITSMLGRLGKQSQFIQGQRVTDAETMEIVEMVLVGKINKEIVANIHRYGGKAIGLCGKDGHLIEARKQVAHIQKDGEEMDLDLGYVGQVERVNPGIIETVIAEGYIPVVAPIGVGPEGESYNINADLV 196          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_BORPD (Acetylglutamate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=argB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.743e-36
Identity = 87/206 (42.23%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  260 VTDTQTPAE-----FRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +TDT  PA       +  +LSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+ G  AVGL+G DG L  AR    ++K        +GFVG++ +V+P V++ L +   IPVI+ +   E G +YNINAD V
Sbjct:    1 MTDTPDPAAVSSPAIKAAVLSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTFVQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQARKKLMANKENPQEPIDIGFVGDITQVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINADVV 203          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_CLOB87.825e-3744.81Acetylglutamate kinase OS=Clostridium beijerinckii... [more]
ARGB_NITEC1.022e-3645.55Acetylglutamate kinase OS=Nitrosomonas eutropha (s... [more]
ARGB_METB61.335e-3646.11Acetylglutamate kinase OS=Methanoregula boonei (st... [more]
ARGB_CLOK51.335e-3646.93Acetylglutamate kinase OS=Clostridium kluyveri (st... [more]
ARGB_CLOK11.335e-3646.93Acetylglutamate kinase OS=Clostridium kluyveri (st... [more]
ARGB_CELJU1.335e-3644.79Acetylglutamate kinase OS=Cellvibrio japonicus (st... [more]
ARGB_RHIL31.743e-3644.22Acetylglutamate kinase OS=Rhizobium leguminosarum ... [more]
ARGB_NITEU1.743e-3645.55Acetylglutamate kinase OS=Nitrosomonas europaea GN... [more]
ARGB_MOOTA1.743e-3644.72Acetylglutamate kinase OS=Moorella thermoacetica (... [more]
ARGB_BORPD1.743e-3642.23Acetylglutamate kinase OS=Bordetella petrii (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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