CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ERYLH (Acetylglutamate kinase OS=Erythrobacter litoralis (strain HTCC2594) GN=argB PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.277e-36
Identity = 88/204 (43.14%), Postives = 116/204 (56.86%), Query Frame = 2
Query:  260 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP------SPNSD-----KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +T T+     + ++L E+LP+ Q++ G+T VVKYGG AM   +                     PV+VHGGGP+I   LKR G+E  F DGLRVTD  T E+  MVL G +NK LV  I +AG  A+G+SG DG L TA         P S       LGFVGE   VD T+++  V++G IPV+A + A E G +YNINADT+
Sbjct:    1 MTATEKTELAKAEVLIEALPYFQRYAGRTFVVKYGGHAMGDPKAAREFAEDIVLLKAVGI---NPVVVHGGGPQIGAMLKRLGVESTFVDGLRVTDKATAEVAEMVLSGAINKELVGWIAQAGGKAMGVSGKDGSLVTATKLERTTRDPESQIEQILDLGFVGEPTHVDTTILDTAVSAGMIPVVAPIGAGEDGHTYNINADTM 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_THICR (Acetylglutamate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=argB PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.973e-36
Identity = 88/191 (46.07%), Postives = 112/191 (58.64%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +L+E+LP+IQ+F GKTIVVKYGG AM      N                  PV+VHGGGP+I   L+R G +  F  G+RVTD+ TM+IV MVL G VNK +V+LI++    AVGL+G DG L  A+            +P    LG VGEV R++  V++ L+    IPVIA V  DE G SYNINAD V
Sbjct:   14 VLAEALPYIQRFSGKTIVVKYGGNAMTEEALKNGFARDIVLMKLVGM---NPVVVHGGGPQIGHLLERVGKQSEFIQGMRVTDSETMDIVEMVLGGMVNKEIVNLIHQHNGNAVGLTGKDGNLIRAKKMEMTAFNEDLNAPELIDLGHVGEVERINTKVLDMLIQDDFIPVIAPVGVDEQGHSYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_HALHL (Acetylglutamate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.973e-36
Identity = 90/202 (44.55%), Postives = 116/202 (57.43%), Query Frame = 2
Query:  266 DTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR------PSPNSD-----KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +T    +    +L E+LP+I++FRGKTIVVK+GG AM     +                  R V+VHGGGP+I   L+R G E  F  G+RVTDA TM++V MVL G VNK +V+LI+  G  AVGL+G DG L  AR      P P +       +G VGEV  +DP V+E L +   IPV+A +  DE G SYNINAD V
Sbjct:    3 ETPIDPDLTAQVLVEALPYIRRFRGKTIVVKFGGNAMVD---EALKVAFARDIVLMRLVGFRVVVVHGGGPQIGNLLERIGKETEFVQGMRVTDAETMDVVEMVLGGLVNKEIVNLISAQGGRAVGLTGKDGGLIRARKLEVEQPGPENQVPEIIDIGHVGEVDHIDPAVVEMLDSGEFIPVVAPIGVDERGTSYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHIE6 (Acetylglutamate kinase OS=Rhizobium etli (strain CIAT 652) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 87/199 (43.72%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  272 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    3 ESESEIQARLLAQALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTIKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_NOVAD (Acetylglutamate kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 88/199 (44.22%), Postives = 114/199 (57.29%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-------PSPNSD---------KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            + + L+E+LP++Q++ GKT VVKYGG AM   +                     PV+VHGGGP+I   LK  GIE  F DGLRVTD  T E+  MVL G +NK LVS I +AG  A+G+SG DG +  AR       P   +D          LGFVGE  R+D TVI+ +  +G IPVIA +   E G++YNINADT+
Sbjct:   12 KAETLTEALPYLQRYAGKTFVVKYGGHAMGDPE---LAQDFAEDIVLLKAVGINPVVVHGGGPQIGRMLKALGIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVDLGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINADTM 207          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CLOD6 (Acetylglutamate kinase OS=Clostridium difficile (strain 630) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 86/182 (47.25%), Postives = 112/182 (61.54%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            + + L E+LP+I+K +GKTIVVKYGG+AMK   KD                    VLVHGGG EIN  L +  IE  F +GLR TD  TMEIV MVL G+VNK LV+ I+  G  AVGL G+D  +    P  N + LGFVGE+ +V+  +IE  + SG+I VIA++   + G++YNIN DT
Sbjct:    6 KANTLIEALPYIEKHQGKTIVVKYGGSAMK---KDGLKESVMEDLVLMSYVGINIVLVHGGGAEINKMLAKVDIESKFVNGLRYTDEETMEIVKMVLAGKVNKDLVNKIHTKGGKAVGLCGIDNNMILCDPYKNYE-LGFVGEIKKVNVELIESCLKSGYISVIATIGVGDDGETYNINGDT 183          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACICJ (Acetylglutamate kinase OS=Acidiphilium cryptum (strain JF-5) GN=argB PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/204 (43.63%), Postives = 116/204 (56.86%), Query Frame = 2
Query:  260 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++D    A  +  I++ +LP+++++ G TIVVKYGG AM    +++                  PV+VHGGGP+IN  LKR  I+  F DGLRVTDA  +E+V MVL G VNK +  LIN+AGA AVG+ G DG L  AR    + +           LGFVGE   VD  VI  L  +G IPV+A V     G +YNINADTV
Sbjct:    3 ISDRHADAAEQARIVALALPYLRRYAGATIVVKYGGHAMG---EESLAEEFGRDIALLKQVGINPVVVHGGGPQINAMLKRLAIQSTFVDGLRVTDAAMVEVVEMVLAGTVNKMVAGLINRAGALAVGICGKDGGLIRARKLTRTRRDPEGAIERALDLGFVGEPEHVDVRVIHALTGAGLIPVVAPVGVGADGATYNINADTV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBY (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AYE) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBT (Acetylglutamate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=argB PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBS (Acetylglutamate kinase OS=Acinetobacter baumannii (strain SDF) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_ERYLH2.277e-3643.14Acetylglutamate kinase OS=Erythrobacter litoralis ... [more]
ARGB_THICR2.973e-3646.07Acetylglutamate kinase OS=Thiomicrospira crunogena... [more]
ARGB_HALHL2.973e-3644.55Acetylglutamate kinase OS=Halorhodospira halophila... [more]
ARGB_RHIE63.884e-3643.72Acetylglutamate kinase OS=Rhizobium etli (strain C... [more]
ARGB_NOVAD3.884e-3644.22Acetylglutamate kinase OS=Novosphingobium aromatic... [more]
ARGB_CLOD63.884e-3647.25Acetylglutamate kinase OS=Clostridium difficile (s... [more]
ARGB_ACICJ3.884e-3643.63Acetylglutamate kinase OS=Acidiphilium cryptum (st... [more]
ARGB_ACIBY3.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIBT3.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIBS3.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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