CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBC (Acetylglutamate kinase OS=Acinetobacter baumannii (strain ACICU) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIB5 (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AB0057) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIB3 (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=argB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.884e-36
Identity = 89/193 (46.11%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR           S     LG VGEV  V   V+E    S  IPVIA +  DE G +YNINAD V
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHILW (Acetylglutamate kinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=argB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 87/199 (43.72%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  272 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    3 ESESELQARLLAKALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTVKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHIEC (Acetylglutamate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=argB PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 87/199 (43.72%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  272 QTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            ++ +E +  +L+++LPF+Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    3 ESESEIQARLLAQALPFMQRYENKTIVVKYGGHAMG---NPELGKAFASDIALLKQSGVNPIVVHGGGPQIGAMLTKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTIKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PSEE4 (Acetylglutamate kinase OS=Pseudomonas entomophila (strain L48) GN=argB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 85/192 (44.27%), Postives = 114/192 (59.38%), Query Frame = 2
Query:  296 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINAD V
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVTRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MARAV (Acetylglutamate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=argB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 88/191 (46.07%), Postives = 114/191 (59.69%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP------SPNSDK-----LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +LS  LP+IQ+F GKT+V+KYGG AM   + ++                  P++VHGGGP+I   L+R  I+  F +G+RVTDA TM++V MVL G+VNK +VSLIN  G TAVGL+G D  L  AR       SP  ++     +G VGEVA V+  VI+ L  S  IPVIA +     G SYNINAD V
Sbjct:    6 VLSRGLPYIQRFTGKTVVIKYGGNAM---ENEDLKSSFARDVVLMKLVGINPIVVHGGGPQIGELLERLNIQSRFVNGMRVTDAETMDVVEMVLGGQVNKEIVSLINAHGGTAVGLTGKDANLIRARKLEVVNRSPELERPEIIDIGHVGEVASVNVDVIDMLTRSNVIPVIAPIGVGPDGASYNINADLV 193          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PARL1 (Acetylglutamate kinase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=argB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 86/194 (44.33%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            R  ILSE+LPF+Q++  +T+VVKYGG AM   +                     P++VHGGGP+I   L R GI+  F  GLR+TD  T+EIV MVL G +NK +V+ +N+AG  AVGL G DG L  AR        P  N +K   LGFVGE  +++P +++ +  S  IPVIA V     G +YNINADTV
Sbjct:   18 RARILSEALPFMQRYDKRTVVVKYGGHAMGDEE---LGAEFARDIVLLKQAGLNPIVVHGGGPQIGAMLNRLGIKSEFSGGLRITDKATVEIVEMVLAGSINKQIVAQLNQAGGRAVGLCGKDGNLVVARKVHQKVHDPESNIEKLLDLGFVGEPEKINPEILDVIQKSDIIPVIAPVGVSRDGHTYNINADTV 208          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_GEOSL (Acetylglutamate kinase OS=Geobacter sulfurreducens GN=argB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 86/193 (44.56%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            + + L E+LP+I++F GKTIV+KYGG AM     +                   PV+VHGGGP+IN  LKR+GI   F  G+RVTDA TM++V MVL G+VNK +V  +N+ G  AVGLSG DG L   R           +  S  +GFVG+V +V+  +I+ L +   IPVIA V   E G+SYN+NAD V
Sbjct:    7 KANTLMEALPYIRRFSGKTIVIKYGGHAMAD---EALKESFALDVIMLKSLGINPVVVHGGGPQINETLKRYGIVSEFVKGMRVTDAATMQVVEMVLTGQVNKEVVGYLNQHGGRAVGLSGKDGNLLLCRKLLQEVRQDDGTVESVDIGFVGDVVKVNQELIQTLEHGKFIPVIAPVGVGEQGESYNVNADLV 196          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CHRVO (Acetylglutamate kinase OS=Chromobacterium violaceum GN=argB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 87/194 (44.85%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  275 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDG------RLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            T A  + +IL+E+LP+I++F GKTIV+KYGG AM     D                   PV+VHGGGP+IN  L R G +  F  G+RVTDA TME+V MVL G VNK +VSLINK G  AVGL+G DG      +LF          +G VGE+  +DP ++  L +   IPV+A +     G++YNINAD V
Sbjct:    3 TDAAEKANILAEALPYIREFAGKTIVIKYGGNAMTD---DALKEGFAKDVVLLKLVGMNPVVVHGGGPQINDLLARVGKQGEFIQGMRVTDAETMEVVEMVLGGLVNKEIVSLINKHGGKAVGLTGKDGHFIRARKLFLKTDGDEDVDIGQVGEIEAIDPALVSLLDSQDFIPVVAPIGVGVDGEAYNINADLV 193          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_ACIBC3.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIB53.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIB33.884e-3646.11Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_RHILW5.072e-3643.72Acetylglutamate kinase OS=Rhizobium leguminosarum ... [more]
ARGB_RHIEC5.072e-3643.72Acetylglutamate kinase OS=Rhizobium etli (strain C... [more]
ARGB_PSEE45.072e-3644.27Acetylglutamate kinase OS=Pseudomonas entomophila ... [more]
ARGB_MARAV5.072e-3646.07Acetylglutamate kinase OS=Marinobacter aquaeolei (... [more]
ARGB_PARL16.624e-3644.33Acetylglutamate kinase OS=Parvibaculum lavamentivo... [more]
ARGB_GEOSL6.624e-3644.56Acetylglutamate kinase OS=Geobacter sulfurreducens... [more]
ARGB_CHRVO6.624e-3644.85Acetylglutamate kinase OS=Chromobacterium violaceu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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