EY756567

Overview
NameEY756567
Unique NameEY756567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756567_ssr261 microsatellite EY756567_ssr261:261..275. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13239 contig Csv1_Contig13239:336..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: CTBP1_HUMAN (C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 1
Query:  163 FHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW-----NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            +H   +T E ++K K L++++  G G D+ID+      G+ V  V  ++V   A+  L  IL L R     H  +  G        +  VA  A  + G+T+G +G GR+G+ +  R K F  N+L++D    D  +E+  G +    L  +L   D V ++  L E    + +   + +M++G  +VN ARG ++D +A+  A   G I G + DV
Sbjct:   76 YHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDV 291          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: DDH2_SCHPO (2-hydroxyacid dehydrogenase homolog 2 OS=Schizosaccharomyces pombe GN=SPAC186.02c PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 1
Query:  238 GSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            G ++++L       +TV  V   +  +V+E  +  +L L R     + +V   ++N+ G+     D+ GKTVG +G G+IG  + +  K  F C++L +D +  D +LE   G +F E  + +L K D + ++ PLT  T  + + D +A MKKGV IVN +RG ++DT+A+VDA  SG + G + DV
Sbjct:   78 GYNNVNLKAASEYKITVVHVPSYSPFAVSEFTVGLLLSLNRKIHRAYVRVREDDFNIVGLL--GCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYD-INPDKKLENY-GVQFVEQ-NEVLKKADFLCLHCPLTPSTTHIVNSDSLALMKKGVTIVNTSRGGLIDTKALVDAIDSGQVGGCAIDV 260          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  211 LQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED---LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            ++ + T  +G +HID       G++V  V  S   SVA+  LM +L+ +R      H V    + +  V  R  +L   TVG +G G IG+ +++RL+ F C +L +D  +           K E D   LD +L   DIV ++ PL   TR +  + +I +MK+G  ++N  RGA++DT ++V+A  SG + G + DV
Sbjct:   73 VKYISTRSIGCNHIDTTAAERMGISVGTVAYSPD-SVADYALMLMLMAIRGAKSTIHAVAQQNFRLDCV--RGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYDNSR-----------KIEADYVQLDELLKNSDIVTLHVPLCADTRHLIGQRQIGEMKQGAFLINTGRGALVDTGSLVEALGSGKLGGAALDV 257          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: CTBP2_XENLA (C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 61/217 (28.11%), Postives = 107/217 (49.31%), Query Frame = 1
Query:  163 FHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW-----NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            +H   ++ E ++K K L++++  G G D+ID+      G+ V  +  ++V   A+  L  IL L R     H  +  G        +  VA  A  + G+T+G +G GRIG+ +  R K FN  ++++D    D  +E+  G +    L  +L   D + ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G I G + DV
Sbjct:   79 YHTITLSREDLEKFKALRIIIKIGSGYDNIDIKSAAELGIAVCNIPSASVEETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADG-VERSLGLQRMATLQELLMHSDCITLHCNLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKDGRIRGAALDV 294          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: CTBP1_XENLA (C-terminal-binding protein 1 OS=Xenopus laevis GN=ctbp1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20
Identity = 62/217 (28.57%), Postives = 106/217 (48.85%), Query Frame = 1
Query:  163 FHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW-----NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            +H   +T E ++K K L++++  G G D+ID+      G+ V  V  ++V   A+  +  IL L R     H  +  G        +  VA  A  + G+T+G +G GR+G+ +  R K F  N+ ++D    D  +E+  G +    L  +L   D V ++  L E    + +   I +M++G  +VN ARG ++D +A+  A   G I G + DV
Sbjct:   76 YHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTMCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKTFGFNVFFYDPYLSDG-IERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDV 291          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 1.693e-19
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR+   FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRVHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 1.693e-19
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_SHIF8 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri serotype 5b (strain 8401) GN=ghrB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.693e-19
Identity = 64/206 (31.07%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G  H+AG
Sbjct:   56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHVAG 259          

HSP 2 Score: 21.9422 bits (45), Expect = 1.693e-19
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.693e-19
Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR +  FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAQFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 1.693e-19
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLI (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12) GN=ghrB PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 2.202e-19
Identity = 64/209 (30.62%), Postives = 104/209 (49.76%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 2.202e-19
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ECODH (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12 / DH10B) GN=ghrB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.202e-19
Identity = 64/209 (30.62%), Postives = 104/209 (49.76%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 2.202e-19
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
The following BLAST results are available for this feature:
BLAST of EY756567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
CTBP1_HUMAN3.119e-2029.03C-terminal-binding protein 1 OS=Homo sapiens GN=CT... [more]
DDH2_SCHPO4.074e-2034.042-hydroxyacid dehydrogenase homolog 2 OS=Schizosac... [more]
VANH_ENTFA5.321e-2032.16D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
CTBP2_XENLA6.949e-2028.11C-terminal-binding protein 2 OS=Xenopus laevis GN=... [more]
CTBP1_XENLA9.076e-2028.57C-terminal-binding protein 1 OS=Xenopus laevis GN=... [more]
GHRB_SHIFL1.693e-1930.62Glyoxylate/hydroxypyruvate reductase B OS=Shigella... [more]
GHRB_SHIF81.693e-1931.07Glyoxylate/hydroxypyruvate reductase B OS=Shigella... [more]
GHRB_ECOSM1.693e-1930.62Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
GHRB_ECOLI2.202e-1930.62Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
GHRB_ECODH2.202e-1930.62Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756567 ID=EY756567; Name=EY756567; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGGTCTGCG
TGAATGGCTGGAATCGAAAGGTCACCTATATCTTGTCACTGATGACAAAG
AGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCACGTCCTC
ATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGATTAAGAA
GGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATA
TTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACT
GGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAATCCTTAT
TCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTGGGGAAT
GGAATGTTGCCGGTGTTGCTTATAGAGCTTATGATCTTGAAGGAAAGACA
GTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCAACGACT
TAAACCTTTCAATTGTAATCTCCTTTATCATGACCGGGTGAAGATGGATC
CTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTAGATACT
ATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAACAGAAAA
GACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGAAGGGCG
TCTTGATTGTCAACAATGCTCGAGGAGCAATCATGGACACACAAGCTGTT
GTTGACGCTTGCTCTAGTGGACACATTGCAGGTTATAGTGGTGATGTTTG
AATCCACAACCAGCTCCAAGGGACATCCCTGGCGTTACATGCCAAATCAG
GCAATGACCCCTCATGTTTCTGGGACCACTANTGATGCACAGCTACGCTA
TGCTGCGGGAGTCAAG
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