EY756561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.884e-15 Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H + W + G+V + Y + +G YPGG F+PL A +A K KE+ NGRLAM + GF VQ VTGKGP E+L HI+DP +N Sbjct: 101 IHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAG-SQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAV------EGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNN 253
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.767e-15 Identity = 58/159 (36.48%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQDIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ K G+ W+ AG A+ F+ + L H I W V + + Y + +G PGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP N Sbjct: 101 IHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAG-AQIFSEGGLDYAGNPNLIHAQSILAIWAC-----QVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 253
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 56/168 (33.33%), Postives = 79/168 (47.02%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVF-TKIGI-INAPQWYDAGKA-------EYFASSSTL--------FVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 +++RWA+LG +G+L PE+ T G+ P W+ AG +Y S + + ++ +L +E R P DP+ YPG F+PL A E K KE+ NGRLAM + GF VQ VTGKGP +NL H++DP N Sbjct: 90 IHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPAGEGLDPL------------YPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTN 243
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 62/169 (36.69%), Postives = 78/169 (46.15%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTK-IGI-INAPQWYDAGKA-------EYFAS------SSTLFVIEF--ILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PEV K +G+ P W+ AG +Y + S L V+ F +L VE R + G N YPGG F+PL A E K KE+ NGRLAM + GF VQ VTGKGP ENL H+ DP N Sbjct: 101 IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDL--------------YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVAN 255
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.869e-14 Identity = 63/169 (37.28%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGIIN--APQWYDAGKA-------EYFAS------SSTLFVIEF--ILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFA--PTD--EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PEV K ++ P W+ AG +Y + S L V+ F +L VE R + G N YPGG F+PL A PT E K KE+ NGRLAM + GF VQ VTGKGP ENLL H+ +P N Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDL--------------YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 252
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 57/169 (33.73%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTK---IGIINAPQWYDAGKA-------EYFASSSTL--------FVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 +++R +LG +GM+ PE+ I +A W+ AG A Y + S + ++ +L VE R P DP+ YPG F+PL A E K KE+ NGRLAM A LGF VQ VTGKGP ENL H+++P N Sbjct: 107 IHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPL------------YPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAEN 261
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12 Identity = 52/165 (31.52%), Postives = 73/165 (44.24%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKA-------EYFASSSTLFVIEFILFHYVE------IRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 +++RWAMLG +G PE+ K G W+ AG +Y + S + + V+ I ++ P DP+ YPG F+PL A E K KE+ NGRLA + GF VQ VTGKGP +NL H+++P N Sbjct: 88 IHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPL------------YPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVN 240
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 273 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL HI+DP +N Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 273 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL HI+DP +N Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12 Identity = 52/148 (35.14%), Postives = 67/148 (45.27%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSS-----------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFLGFIVQHNVTGKGP 410 ++ RWAMLG +G + E T I W DAGK E SS TL IE ++ Y+E +R + L P + YPGG F+PL A D K E+ + RLAM+AFL F +Q TGKGP Sbjct: 143 IHGRWAMLGTLGAIAVEALTGIA------WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSE-----------------LDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGP 267 The following BLAST results are available for this feature:
BLAST of EY756561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756561 ID=EY756561; Name=EY756561; organism=Citrus sinensis; type=EST; length=651bpback to top |