EY756559

Overview
NameEY756559
Unique NameEY756559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:313..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_BRYMA (Ferredoxin OS=Bryopsis maxima PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23
Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 229
            +D+P+SCR+G+CS+C GK+  GTVDQSEQ+FLDDDQM EG+VLTC AYPTSD TI TH+EEE+ G
Sbjct:   34 IDIPFSCRSGSCSTCAGKIEGGTVDQSEQTFLDDDQMEEGYVLTCVAYPTSDCTILTHQEEEMIG 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_DUNSA (Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAG+CSSC GKV SGTVDQS+QSFLDDDQM  GFVLTC AY TSD TI TH+EE L
Sbjct:   32 VDLPYSCRAGSCSSCAGKVESGTVDQSDQSFLDDDQMDSGFVLTCVAYATSDCTIVTHQEENL 94          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_CYACA (Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23
Identity = 48/63 (76.19%), Postives = 57/63 (90.48%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GK++SGTVDQS+QSFLDD+Q+ EGFVLTC AYPTS+ TI TH+EE L
Sbjct:   36 IDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEAL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.890e-23
Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GK+ +GTVDQS+QSFLDDDQ+  G+VLTC AYPTSD TI TH+EE+L
Sbjct:   36 IDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.890e-23
Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAG+CSSC GKV+SG +DQS+QSFLDDDQ+  G+VLTC AYP SDV IETHKE++L
Sbjct:   76 IDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.890e-23
Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAG+CSSC GKV+SG +DQS+QSFLDDDQ+  G+VLTC AYP SDV IETHKE++L
Sbjct:   76 IDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_SPIPL (Ferredoxin OS=Spirulina platensis PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACS+C G + SGT+DQS+QSFLDDDQ+  G+VLTC AYPTSD TI+TH+EE L
Sbjct:   36 LDLPYSCRAGACSTCAGTITSGTIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEEGL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 229
            DLPYSCRAG+CSSC GK+  G VDQ++ +FLDDDQ+ EG+VLTC AYP SDVTIETHKE EL G
Sbjct:   81 DLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG 144          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_CAPAA (Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 229
            DLPYSCRAG+CSSC GK+  G VDQ++ +FLDDDQ+ EG+VLTC AYP SDVTIETHKE EL G
Sbjct:   34 DLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAG+CSSC GKV  G VDQS+ SFLDD+QM +G+VLTC A+PTSDV IETHKEEEL
Sbjct:   33 IDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of EY756559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_BRYMA3.744e-2370.77Ferredoxin OS=Bryopsis maxima PE=1 SV=1[more]
FER1_DUNSA3.744e-2379.37Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1[more]
FER1_CYACA3.744e-2376.19Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=... [more]
FER1_PLEBO4.890e-2374.60Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 ... [more]
FER1_ORYSJ4.890e-2374.60Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER1_ORYSI4.890e-2374.60Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER_SPIPL8.341e-2374.60Ferredoxin OS=Spirulina platensis PE=1 SV=2[more]
FER_CAPAN8.341e-2373.44Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP... [more]
FER_CAPAA8.341e-2373.44Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=... [more]
FERA_ALOMA8.341e-2376.19Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756559 ID=EY756559; Name=EY756559; organism=Citrus sinensis; type=EST; length=509bp
TTCGTCGACCCACGCGTCCGGCTGAAGAATTGCGCTTGATCTTCCGTACT
CATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTCCTGTCTGGA
ACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGA
AGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAG
AGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATC
TCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAAT
GCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTTT
TTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCAT
CGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACATGGTACCGTTCT
ATAATTAAGAGTCAAGCAAGAACAATGGATCTTTCGTTGTATTTCAAAAA
AAAAAAAAA
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