EY756559

Overview
NameEY756559
Unique NameEY756559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:313..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_PHYES (Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.341e-23
Identity = 48/64 (75.00%), Postives = 57/64 (89.06%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 226
            LDLPYSCRAGACSSC GKV +G+V+Q + SFLD++QM  G+VLTC AYPTSDVTIETHKEE+L+
Sbjct:   34 LDLPYSCRAGACSSCAGKVTAGSVNQEDGSFLDEEQMEAGWVLTCVAYPTSDVTIETHKEEDLS 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PERBI (Ferredoxin OS=Peridinium bipes PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.089e-22
Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            L+LPYSCRAG+CSSC GKVL+G++DQS+Q+FLDDDQ G+G+ LTC  YPTSDVTI+TH E EL
Sbjct:   31 LELPYSCRAGSCSSCAGKVLTGSIDQSDQAFLDDDQGGDGYCLTCVTYPTSDVTIKTHCESEL 93          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_EQUTE (Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.089e-22
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP+SCRAGACSSC GKV+SG+VDQSE SFLDD QM EGFVLTC A P SD+ IETHKEEEL
Sbjct:   33 DLPFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER3_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.858e-22
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACS+C GK+L G VDQS+QSFLDDDQ+  GFVLTC AYPTS+ TI TH+EE L
Sbjct:   35 LDLPYSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQVKAGFVLTCVAYPTSNATILTHQEESL 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_EQUAR (Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.427e-22
Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP+SCRAGACSSC GKV+SG+VD+SE SFLDD QM EGFVLTC A P SD+ IETHKEEEL
Sbjct:   33 DLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_CYAPA (Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 2.427e-22
Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GKV+ GTVDQS+QSFLDD Q+  G+VLTC AYP+SD T++TH+EE L
Sbjct:   36 IDLPYSCRAGACSTCAGKVVEGTVDQSDQSFLDDAQLAAGYVLTCVAYPSSDCTVKTHQEESL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.170e-22
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLPYSCRAG+CSSC GKV +G+VDQS+ +FLD+DQ   GFVLTC AYP  DVTIETHKEEEL
Sbjct:   81 DLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYPKGDVTIETHKEEEL 142          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.140e-22
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACSSC GKV +G V+Q + SFL+++QM  G+VLTC AYPTSDVTIETHKEE+L
Sbjct:   34 LDLPYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSDVTIETHKEEDL 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 7.061e-22
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLP+SCRAGACS+C GK+L G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I TH+EEEL
Sbjct:   34 LDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEEL 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.222e-22
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GK+  G +DQS+QSFLDDDQ+  G+VLTC AYP SD TI TH+EEEL
Sbjct:   36 IDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98          
The following BLAST results are available for this feature:
BLAST of EY756559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER2_PHYES8.341e-2375.00Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_PERBI1.089e-2273.02Ferredoxin OS=Peridinium bipes PE=1 SV=1[more]
FER1_EQUTE1.089e-2280.65Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1[more]
FER3_CYACA1.858e-2276.19Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER1_EQUAR2.427e-2279.03Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1[more]
FER1_CYAPA2.427e-2271.43Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 S... [more]
FER1_SOLLC3.170e-2275.81Ferredoxin-1, chloroplastic OS=Solanum lycopersicu... [more]
FER2_PHYAM4.140e-2274.60Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]
FER_SYNLI7.061e-2274.60Ferredoxin OS=Synechococcus lividus PE=1 SV=2[more]
FER_SYNP49.222e-2271.43Ferredoxin OS=Synechococcus sp. (strain PCC 7418) ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756559 ID=EY756559; Name=EY756559; organism=Citrus sinensis; type=EST; length=509bp
TTCGTCGACCCACGCGTCCGGCTGAAGAATTGCGCTTGATCTTCCGTACT
CATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTCCTGTCTGGA
ACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGA
AGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAG
AGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATC
TCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAAT
GCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTTT
TTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCAT
CGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACATGGTACCGTTCT
ATAATTAAGAGTCAAGCAAGAACAATGGATCTTTCGTTGTATTTCAAAAA
AAAAAAAAA
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