EY756556

Overview
NameEY756556
Unique NameEY756556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:1..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.031e-18
Identity = 56/168 (33.33%), Postives = 78/168 (46.43%), Query Frame = 1
Query:  334 VVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQNVT 822
            + V   G GNF          P   + + +I + +G YRE V V +   N++  G G   T I  +        T  S +  V    F A +I+F+N A     G +  QAVALR+  D +AFY C     QDTL     R FF  C I G++ FIFGN  ++ Q+ T
Sbjct:   91 LTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCT 258          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18
Identity = 55/176 (31.25%), Postives = 89/176 (50.57%), Query Frame = 1
Query:  307 LQSSSVTPNVVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST----TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAV 807
            L ++   P ++      G FKT        P G TKR II++  G YRE V + +    I  +G      +IT      DG+     T  SA++ ++ + F+A +I  +NTA    G +K  QA+++R+  + +AFYNC    +QDT+   +   FF +C + GT  FIFG+  ++
Sbjct:   57 LVAAEAAPRIINVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSM 227          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.116e-18
Identity = 51/176 (28.98%), Postives = 91/176 (51.70%), Query Frame = 1
Query:  304 LLQSSSVTPNVVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-----PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQN 816
            L +  +   +++V  +G G++ +        P G +   I+ ++ G+Y+E V + +    I   G+G+ +T+I  S++ VD      SAT  V    F+A  I+ +N A       S++Q+VA  V AD  AFY+C   +  +TL+ +  R ++  C I G++ FIFG A ++  N
Sbjct:   36 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNN 208          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.116e-18
Identity = 58/170 (34.12%), Postives = 81/170 (47.65%), Query Frame = 1
Query:  334 VVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKH----QAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQNVTSMH 831
            ++V  +G G+FKT        P     R II++  G+Y E V V      +  +G     T +T +       T  +SAT+ V    FLA ++   NT+   K     QA+A+R+  D +AFYNC    +QDTL       FF NC I GT  FIFG  A+ L   T +H
Sbjct:   67 IIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYGTV-ESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGAS-LYLTTQLH 234          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.682e-18
Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 1
Query:  307 LQSSSVTPNVVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST----TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAV 807
            L ++   P ++      G FKT        P G TKR II++  G Y+E V + +    I  +G      +IT      DG+     T  SA++ ++ + F+A +I  +NTA    G +K  QA+++R+  + +AFYNC    +QDT+   +   FF +C + GT  FIFG+  ++
Sbjct:   57 LVAAEAAPRIINVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSM 227          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.539e-17
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  331 NVVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAV 807
            N  V  +G G+FKT          G T+R II+I  GVY+E V + +    I   G      ++T         T   SAT+ V+ + F+A +I  +N+A    G  K  QA+++R+  + +AFYNC    YQDT+   +   FF +C I GT  FIFG+  ++
Sbjct:   42 NTNVKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTV-DSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSL 204          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.331e-17
Identity = 57/175 (32.57%), Postives = 83/175 (47.43%), Query Frame = 1
Query:  340 VAADGSGNFKTXXXXXXXXPQG--GTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQNVTSMHESQFPPKNG 858
            V   G G+F          P     ++ Y I +K G+YRE V +  +   I   G   + T +  S    DG    +S T+ +    F+ R +T QN  G +  +AVALRV AD +AFY C + +YQDTL   +   +F NC I G   FI G+A+++ +     H     P NG
Sbjct:   53 VDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYER---CHLHSLSPNNG 219          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.150e-16
Identity = 54/170 (31.76%), Postives = 82/170 (48.24%), Query Frame = 1
Query:  334 VVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQN 816
            V+V   G GNF T        P   T  + I +KAG+YRE + + +K   I+ +G G+  T +       D ++  +S T A + +  + + ITF N+   PS  +        AVA  +G D SAFY+      QDTL+    R +F  C I G V FI G+  ++ Q+
Sbjct:   29 VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWD----DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQS 194          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16
Identity = 56/172 (32.56%), Postives = 79/172 (45.93%), Query Frame = 1
Query:  334 VVVAADGSGNFKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQN 816
            + V+ +G   F++        P+   K   I+I  G YRE V V      I F G GR  T I       D         T+++A+V V    F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R +F  C I G++ FIFGN  ++ ++
Sbjct:   61 ITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKD 232          
BLAST of EY756556 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.789e-16
Identity = 67/209 (32.06%), Postives = 100/209 (47.85%), Query Frame = 1
Query:  316 SSVTPNVVVAADGSGN--FKTXXXXXXXXPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV----VDGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSDRQFFVNCLIAGTVGFIFGNAAAVLQNVTSMHESQFPPKNGHSQG 870
            ++ T N VV+   S    FKT        P G T  ++I IK GVY E + +T+   N++  G+ R   +I  +        DGS   T  S+T+ +  + F A+ +T +N     A  +K           QAVAL V    D + F +  ++ YQDTLYV   R FF +C I+GTV FIFG+  A+  N   +   +   K+G+  G
Sbjct:   24 AATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTP-FVILIKNGVYNERLTITRN--NLLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSG 229          
The following BLAST results are available for this feature:
BLAST of EY756556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME15_ARATH1.031e-1833.33Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME48_ARATH3.918e-1831.25Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]
PME67_ARATH5.116e-1828.98Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME49_ARATH5.116e-1834.12Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PPME1_ARATH6.682e-1830.68Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PP... [more]
PME63_ARATH2.539e-1733.54Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]
PME11_ARATH4.331e-1732.57Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME55_ARATH2.150e-1631.76Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME68_ARATH3.667e-1632.56Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PMEA_ERWCH4.789e-1632.06Pectinesterase A OS=Erwinia chrysanthemi GN=pemA P... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756556 ID=EY756556; Name=EY756556; organism=Citrus sinensis; type=EST; length=937bp
TGCGGTACCGGTCCGGATTCTTTCGTAGAGCCCGCGTCCGAAAACCCTAT
GCGTGCCGCGATGACCAATCAGGGGACGTGTCTTGATGGGTTCTCTCATG
ATGATGCTAATAAGCACGTGCGGGATGCGTTGTCAGACGGCCAGGTTCAT
GTTGAGAAGATGTGTAGCAATGCGCTTGCTATGATCAAGAACATGACTGA
CACTGACATGATGATCATGAGGACTTCAAACAACAGGAAGCTGATAGAGG
AGACCAGTACGGTTGATGGGTGGCCGGCGTGGCTGTCCACCGGAGACAGG
AGGCTGTTGCAGTCCTCGTCGGTGACACCGAACGTGGTGGTGGCAGCAGA
TGGCAGCGGAAACTTTAAGACGGTGGCGGCAGCGGTGGCGGCGGCTCCTC
AGGGAGGCACTAAGCGGTATATTATTAGGATTAAAGCCGGTGTTTATCGG
GAAAATGTTGAGGTGACAAAGAAGCATAAAAATATAATGTTCATCGGTGA
CGGGAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGATGGAA
GCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTG
GCCCGAGACATTACATTCCAAAACACAGCCGGCCCCTCAAAGCACCAGGC
GGTGGCACTACGAGTGGGAGCTGACCTTTCAGCATTTTACAATTGCGATA
TGTTAGCTTACCAAGACACACTCTACGTCCACTCCGACCGCCAGTTCTTT
GTGAACTGCTTAATTGCTGGCACGGTTGGATTTATTTTTGGTAACGCTGC
AGCCGTGTTACAAAATGTGACATCCATGCACGAAAGCCAATTCCCGCCAA
AAAATGGTCACAGCCAAGGCAAGGCTGACCCTAACCAAACACCGGCATTG
TCATCCAAAATCTAGGATTGGTGCCCCTCCCATTTAA
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