EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11638 contig Csv1_Contig11638:34..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP++ +P G  + N+E  +G  G LARA+G  A +I+    + T  +KLPSG  ++I + C A +GQV   G  +K L +AG+   ++  KR   P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP++ +P G  + N+E  +G  G LARA+G  A +I+    + T  +KLPSG  ++I + C A +GQV   G  +K L +AG+   ++  KR   P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP++ +P G  + N+E  +G  G LARA+G  A +I+    + T  +KLPSG  ++I + C A +GQV   G  +K L +AG+   ++  KR   P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_OENAR (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP++ +P G  + N+E  +G  G LARA+G  A +I+    + T  +KLPSG  ++I + C A +GQV   G  +K L +AG+   ++  KR   P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSK--RWLGKR---PVVRGVVMNPVDHPHGG 231          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_MARPO (50S ribosomal protein L2, chloroplastic OS=Marchantia polymorpha GN=rpl2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 3
Query:   48 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +I +Q +G G        H++    +R +DF     Y+ G +  I +DP R   +  + +        +K   +   G+     +   ++A +++GN LP+ ++P G  + N+E   G  G L RA+G  A II+   +     ++LPSG  ++I   C A IGQ+   G  +   L+ G A  K  + +   PKVRGV MNP++HPHGG
Sbjct:   48 IITSQHRGGG--------HKR---LYRKIDFQRNKKYITGKIKTIEYDPNRNTYICLINYEDG-----EKRYILYPRGIKLDDTIISSEEAPILIGNTLPLTNMPLGTAIHNIEITPGKGGQLVRAAGTVAKIIA--KEGQLVTLRLPSGEIRLISQKCLATIGQI---GNVDVNNLRIGKAGSKRWLGKR--PKVRGVVMNPIDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_DIOEL (50S ribosomal protein L2, chloroplastic OS=Dioscorea elephantipes GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRS-IPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+ + +P G  + N+E  +G  G LARA+G  A +I+    + T R  LPSG  ++I   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 233          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRS--IPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+ +  +P G  + N+E  +G  G LARA+G  A +I+    + T R  LPSG  ++I   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      +  +V  I +DP R A +A + +        +    +A + +  G  V   + A + +GN LP++ IP G  + NVE  VG  G +AR++G    ++    D+   ++KL SG  +++P  C+A IG ++   +    L KAG         RN W    P VRGVAMNPV+HPHGG
Sbjct:   53 HRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGNRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMQVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_RICFE (50S ribosomal protein L2 OS=Rickettsia felis GN=rplB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      +  +V  I +DP R A +A + +        +    +A + +  G  V   + A + +GN LP++ IP G  + NVE  VG  G +AR++G    ++    D+   ++KL SG  +++P  C+A IG ++   +    L KAG         RN W    P VRGVAMNPV+HPHGG
Sbjct:   53 HRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG-----EYSYILAPQKLSVGDRVISSQDADIKIGNCLPLKFIPTGTTLHNVEMKVGKGGQIARSAGTSVDLV--GKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_PSYCK (50S ribosomal protein L2 OS=Psychrobacter cryohalolentis (strain K5) GN=rplB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 68/206 (33.01%), Postives = 103/206 (50.00%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQK 740
            +R +DF      +   V  I +DP R A +A + +        ++   IAA+    G  V  G+ + +  GN LP+++IP G V+ N+E  +G    +ARA+G    ++    D     ++L SG  + +   CRA+IG+V+      K L KAG +       R   P VRGVAMNPV+HPHGG   ++ G   T    +P GQK
Sbjct:   62 YRIIDFKRTKDNIPATVERIEYDPNRTAHIALLKYADG-----ERRYIIAAKKQAVGDTVMSGELSPIRPGNCLPLKNIPLGTVIHNIELKIGKGAQMARAAGASVQLLGR--DGIYAILRLRSGETRRVHVNCRAVIGEVSNTENNLKSLGKAGASRW-----RGIRPSVRGVAMNPVDHPHGGGEGRNKGRHPT----SPWGQK 251          
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RK2_OENGL1.356e-2034.0250S ribosomal protein L2, chloroplastic OS=Oenothe... [more]
RK2_OENEH1.356e-2034.0250S ribosomal protein L2, chloroplastic OS=Oenothe... [more]
RK2_OENBI1.356e-2034.0250S ribosomal protein L2, chloroplastic OS=Oenothe... [more]
RK2_OENAR1.356e-2034.0250S ribosomal protein L2, chloroplastic OS=Oenothe... [more]
RK2_MARPO1.356e-2030.0050S ribosomal protein L2, chloroplastic OS=Marchan... [more]
RK2_DIOEL1.356e-2033.1750S ribosomal protein L2, chloroplastic OS=Dioscor... [more]
RK2A_CHLSC1.356e-2033.0050S ribosomal protein L2-A, chloroplastic OS=Chlor... [more]
RL2_RICM51.771e-2032.8350S ribosomal protein L2 OS=Rickettsia massiliae (... [more]
RL2_RICFE1.771e-2032.8350S ribosomal protein L2 OS=Rickettsia felis GN=rp... [more]
RL2_PSYCK1.771e-2033.0150S ribosomal protein L2 OS=Psychrobacter cryohalo... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
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