EY756518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14 Identity = 56/159 (35.22%), Postives = 72/159 (45.28%), Query Frame = 1 Query: 247 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG--YPGGKFFDPLCLA 657 P +L+G PGDYG+D GL DP R E+IHGRWAM +G V Q W G+ WF+AG+ +P + S ++LG Q+LLMG VE R N + GE YPGG++FDPL LA Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR----------------------INGLDGVGEGNDLYPGGQYFDPLGLA 203
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 247 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGSL---LGTQLLLMGWVESKR 519 P +LDGS PGD+GFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +G+L L + L + +VE +R Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 253 WLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVVGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL 648 +LDG LPGD+GFDPLGL DP F+ KW E+I+GR+AM G +G+A + + WF+ G P A +++ +L ++ LMG+ E +R+ D+ P S ++ E +G+ YPGG F+PL Sbjct: 65 YLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFL----GLEKGLGGSGDPAYPGGPLFNPL 209
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12 Identity = 53/159 (33.33%), Postives = 70/159 (44.03%), Query Frame = 1 Query: 247 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQG--YPGGKFFDPLCLA 657 P +L+G PGDYG+D GL DP R E+IHGRWAM +G V + W + WF+AG+ +P + S ++LG Q++LMG VE R N GE YPGG++FDPL LA Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFR----------------------INGLPGVGEGNDLYPGGQYFDPLGLA 200
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11 Identity = 43/129 (33.33%), Postives = 59/129 (45.74%), Query Frame = 1 Query: 193 PPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI--------FVGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 519 P + W+ G + P +L G PGDYG+D GL DP K YRE E+IH RWA+ +GI + G + WF+AGA P I + + L Q++LMG +E R Sbjct: 42 PDRAKWL----GPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR 166
BLAST of EY756518 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11 Identity = 53/157 (33.76%), Postives = 69/157 (43.95%), Query Frame = 1 Query: 247 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI--------FVGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLA 657 PE+L G PGDYG+D GL DP YRE ELIH RWA+ +GI + G + WF+AGA + I S + L Q++LMG E+ R + +E F + + YPGG FDPL LA Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-----------------ANGGSEGFLDDL-DTLYPGGP-FDPLGLA 188 The following BLAST results are available for this feature:
BLAST of EY756518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756518 ID=EY756518; Name=EY756518; organism=Citrus sinensis; type=EST; length=901bpback to top |