EY756499

Overview
NameEY756499
Unique NameEY756499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11169 contig Csv1_Contig11169:1359..2251. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756499 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.855e-33
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 3
Query:   18 GKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKAN-VNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDS--SRKLLEEVQSSYYLVSLVDNDYINGD 566
            G L+  PWS++  +  E   I   L ++N    +TINSQP VNG RS+    GWG   GYVYQK YLEF     KL  L+D  K   F+T+ A++ +G+  +N  + +  NAVTWG+FP +EI+QPT+V+  SF  WK+E + I +  W     + D   S + ++ +   Y LV++VDNDYI+ D
Sbjct:  407 GNLKCLPWSDIP-INDEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGYVYQKQYLEFMLPKTKLPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPGREILQPTIVEKISFLAWKEEFYHILN-EWKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDNDYISPD 590          
BLAST of EY756499 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.205e-31
Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = 3
Query:   15 LGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYIN 560
            +  + + PW + + ++ ETK I + L K+N   + T+ SQPAVNG  S     GWG  GG V+QKA++E F + + L   + K    P +T+ A N +  +  N  +   +AVTWGV+P +EIIQ T++   SFK W  E+F++W   WA+LY +   SRKLLE   +  +LV+++ +D+++
Sbjct:  450 MSDISAIPWID-EPVEVETKTIAKYLLKLNGNSWWTVGSQPAVNGAPSADPVFGWGPKGGRVFQKAFVECFVNGKDLKDFITKWHDNPQVTYYAGNNKSEFLTNAPKDGASAVTWGVYPGREIIQSTIIAEVSFKAWLSESFQVWG-EWANLYSKNTPSRKLLENCINDRWLVTVIHHDFMD 629          
BLAST of EY756499 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 72/187 (38.50%), Postives = 106/187 (56.68%), Query Frame = 3
Query:   18 GKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEK----LTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGD 566
            G   + PWS+L GL  ET +I E+L ++N +G+LT+ SQPA N   S     GWG   G +YQKA++E F   ++    L   +D      F ++ A +  G+++ N++    + VTWGVFP   + Q T+++  SFK W+DEAF IWS  WA L+P    +  LL  V   Y LVS+V +D+   D
Sbjct:  464 GSTDAIPWSDL-GLSAETALIQEELIQLNYRGYLTLASQPATNATLSSDKIFGWGPAKGRLYQKAFVEMFIHRQQWETTLKPKLDHYGRRKF-SYYAGDSSGSFETNLDPHSSSVVTWGVFPNSPVKQTTIIEEESFKAWRDEAFSIWS-EWAKLFPRNTPANILLRLVHKDYCLVSIVHHDFKETD 647          
The following BLAST results are available for this feature:
BLAST of EY756499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MTHR2_YEAST6.855e-3340.86Methylenetetrahydrofolate reductase 2 OS=Saccharom... [more]
MTHR2_SCHPO2.205e-3137.36Methylenetetrahydrofolate reductase 2 OS=Schizosac... [more]
MTHR1_YEAST3.184e-3038.50Methylenetetrahydrofolate reductase 1 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-C10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756499 ID=EY756499; Name=EY756499; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTGCCTTGGGAAATTGAGAAGCAGTCCTTGGTCAGAGTTA
GACGGGCTTCAGCCAGAGACCAAAATCATAAATGAACAGCTTGGAAAGAT
CAATGTGAAAGGTTTCCTCACTATCAACAGCCAGCCGGCAGTCAATGGTG
AAAGATCCGATTCATCTTCTGTTGGTTGGGGTGGGCCAGGAGGATATGTT
TATCAGAAAGCATATCTAGAGTTTTTCTGCTCACCAGAGAAGTTGACTGC
ACTTGTTGACAAAAGCAAAGCTCTTCCATTCATAACCTTCATGGCTGTCA
ACAAAGAAGGGAACTGGAAAGCCAATGTTAATCAAACTGATGTGAATGCC
GTAACTTGGGGGGTCTTCCCAGCCAAGGAGATTATCCAACCGACTGTTGT
TGACCCTGCCAGCTTCAAGGTGTGGAAGGATGAGGCATTCGAAATTTGGT
CAAGATCATGGGCTTCATTGTACCCCGAGGGAGACTCATCAAGAAAATTG
CTCGAAGAGGTGCAGAGCAGCTATTATTTGGTCAGCTTGGTGGATAATGA
TTACATCAATGGGGATCTTTTTACTGTTTTTGCCGATCTCTAGGTTAAGC
TGCTGTACTCCATGGAATTACAACCTGATTTCATCAATGGTCATCTTGTA
CCCTCACTGAAGCCATTTGAAGTGTTGCCTTCTCTCAAGTTAATTTCAAT
TGAAATTTATCCAAAATTACAAGCTTACTGATTGTATTAATAAGATGATA
GGGATTTTGATACCTCCCTGATGCTCCATGCAAATTAAATNGGCAGCTTT
CATTTCTATGAATCGCTCCTAAATTATTTGTCATGGAAAAGTGCATCCTG
AAATTGTAGCGTTACCGAATATATTTAATCCAATAAGTGAGTCT
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