EY756463

Overview
NameEY756463
Unique NameEY756463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7608 contig Csv1_Contig7608:182..1103. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756463 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.992e-19
Identity = 60/172 (34.88%), Postives = 90/172 (52.33%), Query Frame = 2 
Query:   23 TYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIASGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNNNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQ-HNNHYDG 535
            ++ L+   GK      HW+P  G   L  +EA +       +  ++L++SI      + +L IQ M  +++ +  F+  +VTK+    ++PL   G+LV N NI   F E     F P  +V G+ ++ D LLQ R+FSY DTQ +R GPN  QL  N P  A  HNN+ DG
Sbjct:  214 SFRLVTDNGKQFQCSNHWQPLQGFIDLGVEEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385
The following BLAST results are available for this feature:
BLAST of EY756463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA9.992e-1934.88Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756463 ID=EY756463; Name=EY756463; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGTCTGGTGTTTCACTTACATGCTGATCAATAAGGCTGGGA
AAGCACATTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGT
TTATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGC
TACTCAAGATCTTTATGACTCAATTGCATCTGGAAACTATCCTGAGTGGA
AACTCTACATCCAGATTATGGATCCCGACCATGAGGACAAATTTGACTTT
GACCCACTTGATGTAACCAAGACCTGGCCTGAGGACATCTTGCCCTTGCA
ACCTGTGGGCCGGTTGGTTTTGAACAACAACATTGATAACTTCTTTGCAG
AGAATGAACAGCTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTAC
TATTCAAATGATAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATAC
TCAGAGGCACCGTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCAC
CCAAATGTGCTCAGCACAACAATCATTATGACGGTTTCATGAATTTCATG
CACAGGGATGAGGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCG
TCATGCTGAGATGCATCCAACTCCTCCCTGAATCTGCGGCGGAAGGCGCG
AGAAGTGCATAATTCCAAAGGAAACTACTTCAAACAGCTGGAGAAGATAC
CGATCTTCGGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGA
TGCTTTATCTGATCCACGCGTCACCCATGAGATCCNGCACATATGGATCT
CATACTGGCCTCAGGCTTGCAAGTCTCTGGGTCAGAAAGTTGCATCTCGT
CTGAATGTGGAGCCTACATTTTACTGTGATGCGAAGCTGAGGGACTCACA
AGAGTTTCNAGGAGTAACC
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