EY756460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60 Identity = 101/149 (67.79%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S+ FPATKK N+DITS+ASNGGRVQCMKVWP +K++ETLSYLPPL+ + L +++ YLL + W+PCLEFE + G+VYREHH+SPGYYDGRYWTMWKLPM+GCTD VL E+ E +KEYP++F+RIIGFD+ RQVQC+SF+A KP G Sbjct: 32 STVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.901e-60 Identity = 103/149 (69.13%), Postives = 127/149 (85.23%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S++AFP TKK N D +++ASNGGRVQCMKVWPP G K++ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 25 SNAAFPVTKKVN-DFSTLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_SILPR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 6.655e-60 Identity = 105/147 (71.43%), Postives = 124/147 (84.35%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 S+SAFP ++K+N DITS+A+NGGRV CM+VWPP LKKFETLSYLP LS+E+LLKEI+YLL GW+PCLEFE+ VYRE++ SPGYYDGRYWTMWKLPM+GCTDA+ V EV E + YP + VRIIGFDNKRQVQCISF+A KP Sbjct: 30 STSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 8.692e-60 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 25 SNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_FLAPR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Flaveria pringlei GN=RBCS2 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 8.692e-60 Identity = 103/149 (69.13%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S+ AFPATKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 30 SNVAFPATKKAN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPEG 177
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.135e-59 Identity = 101/149 (67.79%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 +++AFP TKK N +++ SNGGRVQCMKVWPP G KK+ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SSPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQC+SF+A+KP G Sbjct: 25 ANAAFPVTKKVNG-FSTLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.483e-59 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S++AFP TKK N D +++ SNGGRVQCMKVWPP G K++ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 25 SNAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.483e-59 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 +++AFP TKK N D +++ SNGGRVQCMKVWPP G KK+ETLSYLP L++ L KE+ YLLR+ W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ V+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 25 ANAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.639e-58 Identity = 100/149 (67.11%), Postives = 127/149 (85.23%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S++ P ++++N S+ SNGGR++CM+VWP G+KKFETLSYLPPLS EALLK++ YL+RS W+PCLEF + G+++REH++SPGYYDGRYWTMWKLPM+GCTDAT VL EV EV+KEYP ++VRIIGFDN RQVQC+SF+A KPPG Sbjct: 21 STAGLPVSRRSNASSASV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 167
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.639e-58 Identity = 101/147 (68.71%), Postives = 124/147 (84.35%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 S+SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YL+R+GW+PCLEF LE G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA V+KE E +KEYP +F+R+IGFDN RQVQC+SF+ KP Sbjct: 33 SASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178 The following BLAST results are available for this feature:
BLAST of EY756460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756460 ID=EY756460; Name=EY756460; organism=Citrus sinensis; type=EST; length=660bpback to top |