EY756458

Overview
NameEY756458
Unique NameEY756458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756458_ssr546 microsatellite EY756458_ssr546:546..557. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.023e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E  CPDD YILD AE+ G DLPYSCRAGSCS+CAGK            +L+DDQ+  G+VLTCVAYP SDVT+ETHK+EE++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.023e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E  CPDD YILD AE+ G DLPYSCRAGSCS+CAGK            +L+DDQ+  G+VLTCVAYP SDVT+ETHK+EE++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.023e-31
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 3
Query:  216 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 503
            MATYKV LI   EG  Q IE  DDTYILDAAE+AG+DLPYSCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSD T+ETHK+EE+
Sbjct:    1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E  CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQI  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDLT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQI  G+VLTCVAYP SDVT+ETHK+E ++
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 58/96 (60.42%), Postives = 76/96 (79.17%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            A+YKV  +TP G   I CP DTY+LDAAE++G+DLPYSCRAG+CS+CAGK            FLE++Q++AG+VLTCVAYPTSDVT+ETHK+E+++
Sbjct:    2 ASYKVTFVTPSGTNTITCPADTYVLDAAEESGLDLPYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSDVTIETHKEEDLT 97          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQ+  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 506
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQ+  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPIEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLT 96          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30
Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 3
Query:   45 TLRKQQKITMAALSSAMVSTSFIRNKPTVTSLKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPEG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 503
            T+R        A+  +  +   I NK    S+ +   + ++ FGLK + N GG  ++ A YKVKL+ P+G E E E  DD YILDAAE+AG+DLPYSCRAG+CSTCAG+            FLED  ++ GYVLTCVAYP SD  + THK+ E+
Sbjct:    3 TVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRS-FGLKCSANSGGATMS-AVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154          
BLAST of EY756458 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.752e-30
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 3
Query:  219 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 503
            ATYKVKLITPEG  E  CPDD YILD+AE+ G DLPYSCRAG+CS+CAGK            FL+DDQ+  G+VLTCVAYP S+VT+ETHK++++
Sbjct:    1 ATYKVKLITPEGPVEFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDL 95          
The following BLAST results are available for this feature:
BLAST of EY756458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_DATST6.023e-3163.54Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU6.023e-3163.54Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_CHLFR6.023e-3169.39Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]
FER1_HYONI7.866e-3163.54Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_LYCCN1.027e-3063.54Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER2_PHYAM1.027e-3060.42Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]
FER2_HYONI1.027e-3062.50Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_SOLNI1.342e-3062.50Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER3_ARATH1.342e-3046.10Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER_SOLLY1.752e-3063.16Ferredoxin OS=Solanum lyratum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-H01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756458 ID=EY756458; Name=EY756458; organism=Citrus sinensis; type=EST; length=732bp
CCACGCGTCCGGGTCACCAATTCTCTCTCTAGCTTCACATTCAGACACTC
AGAAAGCAACAGAAAATAACAATGGCCGCGCTCTCAAGCGCCATGGTCAG
CACCTCATTCATCAGAAACAAGCCAACAGTGACAAGCCTCAAGGCCATGC
CCAACATGGGTCAGGCTTTGTTTGGCCTTAAAGCCAACAACAACAGAGGT
GGACGTGTAATAGCCATGGCTACATACAAAGTCAAGCTCATTACACCCGA
GGGAGAGCAAGAAATTGAGTGTCCTGATGACACATATATTCTTGATGCAG
CTGAAGATGCTGGAATTGATCTCCCATATTCATGCAGGGCTGGTTCTTGC
TCTACTTGTGCTGGGAAAGTTGTCTCTGGTAGTGTTGACCAGTCAGATGG
AAGCTTTCTTGAGGATGATCAAATAGATGCAGGTTATGTTCTCACTTGTG
TTGCTTATCCTACAAGTGATGTTACTGTTGAGACACACAAGGATGAAGAA
ATGTCTTAATTATGCGGCGCTTTAATATAACATGGAGAATTTTGATATTA
TTATTATTAATATTGTGTATGGTTTGGTAATTTAGTGCCTTGTAAGGGGA
AATGTTGAATATTGACGTGCTTTCTTGAATGAGTAATATGAAAAGGGGGG
GATTTGCTCTGTACTTCCCATTGCTGTCACAAATGAAGNTGTTGTAGCTT
TACAATATAAAGATAGAATCATCTCTTTCTAT
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