EY756267

Overview
NameEY756267
Unique NameEY756267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1491 contig Csv1_Contig1491:197..1055. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.786e-20
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 1
Query:  319 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 498
            P+  L CPRC+S +TKFCY+NNY++ QPRHFCK C+RYWT GG +R+VPVG G R+NK +
Sbjct:   91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRT 150          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1
Query:  331 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHY 510
            L CPRC S +TKFCYYNNYN +QPRHFCK+C+RYWT GGT+R++PVG   RK+   +  Y
Sbjct:   32 LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTY 91          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  337 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 504
            CPRC S +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RK++   S
Sbjct:   27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKS 82          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF44_ARATH (Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 1
Query:  310 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQN 543
            LK+P     CPRC+S +TKFC+YNNY+ +QPR+FCKNC+RYWT GG +RN+PVG   RK K        I+   +++N
Sbjct:   17 LKRPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLKVDQSSISEMVSVEN 94          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  337 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA--SHYR 513
            CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RN+PVG G RK   S   SH R
Sbjct:   40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKR 100          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF43_ARATH (Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 1
Query:  337 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNVRTDVPNGVHHP---ALKTNGTVLTFGSDA 624
            C RC+S +TKFCYYNNY+  QPR+FCKNC+RYWT GG +RNVP+G   R  +        I      Q V   +  G H P     + N  V +FG+ +
Sbjct:   27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKRT------RINQPSVAQMVSVGIQPGSHKPFFNVQENNDFVGSFGASS 119          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF45_ARATH (Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  337 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK---NSASHYRHITVSEALQNVR--TDVPNGVH 573
            C RC+S +TKFCYYNNY   QPR+FCKNC+RYWT GG +RN+P+G   R  +   N  S  R ++V     N +  ++V   VH
Sbjct:   27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKRARVNQPSVARMVSVETQRGNNQPFSNVQENVH 110          
BLAST of EY756267 vs. ExPASy Swiss-Prot
Match: DOF42_ARATH (Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 35/84 (41.67%), Postives = 45/84 (53.57%), Query Frame = 1
Query:  337 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNVRTDVPNGVHHPALK 588
            CPRC S  T+F Y+NN   +QPR+ CKNC R WT GG +RN+PV     K     S+   I  S   Q +  ++  G H P  K
Sbjct:   23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK-----SNLPKIDQSSVSQMILAEIQQGNHQPFKK 101          
The following BLAST results are available for this feature:
BLAST of EY756267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF51_ARATH4.786e-2063.33Dof zinc finger protein DOF5.1 OS=Arabidopsis thal... [more]
DOF58_ARATH1.819e-1963.33Dof zinc finger protein DOF5.8 OS=Arabidopsis thal... [more]
DOF35_ARATH5.291e-1966.07Dof zinc finger protein DOF3.5 OS=Arabidopsis thal... [more]
DOF44_ARATH6.911e-1951.28Dof zinc finger protein DOF4.4 OS=Arabidopsis thal... [more]
DOF12_ARATH9.026e-1963.93Dof zinc finger protein DOF1.2 OS=Arabidopsis thal... [more]
DOF43_ARATH3.792e-1743.43Dof zinc finger protein DOF4.3 OS=Arabidopsis thal... [more]
DOF45_ARATH7.152e-1647.62Dof zinc finger protein DOF4.5 OS=Arabidopsis thal... [more]
DOF42_ARATH4.061e-1141.67Dof zinc finger protein DOF4.2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-E07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756267 ID=EY756267; Name=EY756267; organism=Citrus sinensis; type=EST; length=859bp
CCACGCGTCCGTGATGATAGAATCGATCAGGATCCAACTTGTTCAACAAA
TTCTTCACGAGAAAGCGATAAGAGCAGAGACGGAGAAGAAAGAGACTCTG
AGAAGGAGATGTCGGTAGACAAGCCTGTTGAGACCAAACAGGAAGATGAA
GCCCCACCAGAAAATTCTGAAGAGTCCACAAATCCAGGTTCAACCTCGGG
GATCAGTGAGAACCCTAAAGCATTGCCTGTTGAAAAGGAGTGCACTACAG
TGAAGACTTCAAAGACAGAAGAAGAGCAGAGCGAACCTAGTACTTCACAA
GAAAAGACCTTGAAGAAACCTGACAAGATTCTTCCATGCCCACGTTGTAA
TAGTATGGACACTAAGTTCTGCTACTACAACAATTACAATGTAAACCAAC
CACGACACTTCTGCAAGAACTGCCAGAGATACTGGACAGCTGGTGGGACA
ATGCGTAATGTACCTGTAGGTGCTGGTCGTCGAAAGAACAAGAACTCAGC
TTCTCACTACCGTCACATAACTGTCTCGGAAGCCCTCCAAAACGTCCGAA
CTGATGTTCCGAATGGGGTCCACCATCCTGCGTTGAAAACTAATGGTACT
GTACTTACTTTTGGCTCAGATGCACCCCTTTGTGATCAATGGCATCAGTT
CTGAATATTGCTGATAAAACAATGAGGGATTGCACNGAGAATGGGTTTCA
TAAACCTGAGGGAGTGAGATTCGACTTACTTACAGAGGTGGAGAAAATGG
GGATATTATGCACATGGATCTCCGGGCCAGTTTCAATTTCAAAGATGAAG
CAGGCAAACTACTTCCCAGGAGGCAGTGTGCAAAATTGCAGGCTTCCCTC
TCATGTGCT
back to top