EY756262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.406e-67 Identity = 135/204 (66.18%), Postives = 156/204 (76.47%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG PNL+HAQ+ILAIWA+QV LMG V G + G G+ +D P A +PLG Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR-VGGGPLGEGLDKVYP-GGAFDPLG 196
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 3.142e-67 Identity = 137/204 (67.16%), Postives = 155/204 (75.98%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MATST AL+S+F G+ + NELS R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLG P+L+HAQ+ILAIWA QV LMGAV G + G G++ DP P + +PLG Sbjct: 1 MATSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA-GGPLGEVEDPIYP-GGSFDPLG 198
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 3.142e-67 Identity = 136/204 (66.67%), Postives = 153/204 (75.00%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY G PNLIHAQ+ILAIWA QV LMG + G + G G+ +DP P A +PLG Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR-VGGGTLGEGLDPLLP-GGAFDPLG 199
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 5.926e-66 Identity = 134/205 (65.37%), Postives = 153/205 (74.63%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MATS + S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLG PNLIHAQ+ILA+WA QV LMG + G + G G+ +D P A +PLG Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYR-VGGGPLGEGLDKIYP-GGAFDPLG 198
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 1.011e-65 Identity = 131/205 (63.90%), Postives = 154/205 (75.12%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLG P+L+HAQ+ILAIWA QV LMGAV G + G G++ DP P + +PLG Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA-GGPLGEVTDPIYP-GGSFDPLG 201
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.724e-65 Identity = 135/205 (65.85%), Postives = 153/205 (74.63%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MAT + S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLG PNL+HAQ+ILAIWA QV LMG V G + G G+ +D P A +PLG Sbjct: 1 MATCAIQ-QSAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR-VGGGPLGEGLDKIYP-GGAFDPLG 198
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 8.557e-65 Identity = 134/205 (65.37%), Postives = 151/205 (73.66%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MATS + S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLG PNLIHAQ+ILAIWA QV LMG V G + G G+ +D P A +PLG Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR-VGGGPLGEGLDKIYP-GGAFDPLG 198
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.490e-64 Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 2 Query: 227 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLG PNLIHAQ+ILAIWA QV LMG V G + G G+ +D P A +PLG Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR-VGGGPLGEGLDKIYP-GGAFDPLG 170
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.547e-64 Identity = 124/170 (72.94%), Postives = 139/170 (81.76%), Query Frame = 2 Query: 230 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLG PNL+HAQ+ILAIWA QV LMG + G + G G+ +DP P A +PLG Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYR-VGGGPLGEGLDPLYP-GGAFDPLG 197
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 7.244e-64 Identity = 135/205 (65.85%), Postives = 150/205 (73.17%), Query Frame = 2 Query: 143 MATSTMALSSSFVGKAVNLAPSGNEL----SNGG--RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 MATS + S+F GK GNE N G R +MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG+QIF+EGGLDYLG PNLIHAQ+ILAIWA QV LMG V G + G G+ +DP P A +PLG Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR-VGGGPLGEGLDPLYP-GGAFDPLG 198 The following BLAST results are available for this feature:
BLAST of EY756262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756262 ID=EY756262; Name=EY756262; organism=Citrus sinensis; type=EST; length=1046bpback to top |