EY756262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.666e-58 Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 2 Query: 317 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLG P+L+HAQ+ILAIWA QV LMGAV G + G G++ DP P + +PLG Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA-GGPLGEVTDPIYP-GGSFDPLG 139
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 2.201e-56 Identity = 110/177 (62.15%), Postives = 130/177 (73.45%), Query Frame = 2 Query: 143 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQ 664 MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLG PNL+HAQ+ILA+ QV LMG V G + Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR 177 HSP 2 Score: 26.5646 bits (57), Expect = 2.201e-56 Identity = 22/58 (37.93%), Postives = 27/58 (46.55%), Query Frame = 3 Query: 651 LEGYKIAG--GAARGK*LTHLNPGGQL*IHWGLADEPGSXXXXXXXXXXQ*YGRLAMF 818 +EG++I G G G L PGGQ GLAD+P + GRLAMF Sbjct: 173 VEGFRINGLDGVGEGN---DLYPGGQYFDPLGLADDPVTFAELKVKEIKN--GRLAMF 225
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 8.290e-56 Identity = 104/174 (59.77%), Postives = 127/174 (72.99%), Query Frame = 2 Query: 146 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQ 664 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLG PNL+HAQ+ILA+ QV LMG V G + Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFR 174 HSP 2 Score: 26.9498 bits (58), Expect = 8.290e-56 Identity = 22/58 (37.93%), Postives = 27/58 (46.55%), Query Frame = 3 Query: 651 LEGYKIAG--GAARGK*LTHLNPGGQL*IHWGLADEPGSXXXXXXXXXXQ*YGRLAMF 818 +EG++I G G G L PGGQ GLAD+P + GRLAMF Sbjct: 170 VEGFRINGLPGVGEGN---DLYPGGQYFDPLGLADDPTTFAELKVKEIKN--GRLAMF 222
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.048e-54 Identity = 115/178 (64.61%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 179 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEP 712 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLG P+L+HAQ+ILAIW +V LMGAV G + RG G++ DP P Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIA-RGPLGEVTDPLYP 194
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.048e-54 Identity = 109/169 (64.50%), Postives = 132/169 (78.11%), Query Frame = 2 Query: 245 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLG P+L+HAQNI+A A+QV LMG + G + G +G+ +DP P + +PLG Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR-VNGGPAGEGLDPLYP-GESFDPLG 186
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.984e-54 Identity = 108/158 (68.35%), Postives = 123/158 (77.85%), Query Frame = 2 Query: 269 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG P LIHAQNI+A A+QV LMG + G + G +G+ +DP P + +PLG Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR-VNGGPAGEGLDPLYP-GESFDPLG 189
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.793e-46 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 2 Query: 284 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGK--MIDPFEPRWPA--LNPLG 739 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLG +LIHAQ+I+A A+QV LM GL +R G +D + +P +PLG Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLM----GLAEAYRANGGSEGFLDDLDTLYPGGPFDPLG 186
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.794e-42 Identity = 105/217 (48.39%), Postives = 131/217 (60.37%), Query Frame = 2 Query: 95 TRPRTLELTNNSDHCKMATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 T P ++ N + + + L S G+A G G K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAGA IF +GGL+YLG P+LIHAQNI+A A+QV LMG V G + G +G+ +DP P A +PLG Sbjct: 5 TPPEVPDMKNTYSNNECPAAEQELCSEQGGRA------GKSTKKGA-----KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR-VNGGPAGEGLDPLYP-GEAFDPLG 207
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.633e-23 Identity = 58/85 (68.24%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 485 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGAVGGLQNCWRGRSGKMIDPFEPRWPALNPLG 739 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLG PNLIHAQ+ILAIWA QV LMG + G + G G+ +DP P A +PLG Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR-VGGGPLGEGLDPLYP-GDAFDPLG 83
BLAST of EY756262 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.021e-22 Identity = 66/139 (47.48%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 257 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGKPNLIHAQNILAIWALQVALMGA 649 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y GK I +LA+ A V L GA Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVAEVVLLGGA 185 The following BLAST results are available for this feature:
BLAST of EY756262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756262 ID=EY756262; Name=EY756262; organism=Citrus sinensis; type=EST; length=1046bpback to top |