EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BAUCH (Elongation factor Tu OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tuf PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.776e-28
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +   +     + +MVMPGD +KM+V LI P+A +QG+RFAIREGG+TVGAG++  IIE
Sbjct:  307 SEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPI-----DVEMVMPGDNIKMIVNLIAPIAMDQGLRFAIREGGRTVGAGIVTDIIE 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ALKOO (Elongation factor Tu OS=Alkaliphilus oremlandii (strain OhILAs) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.776e-28
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG          +  +MVMPGD V M ++LI P+A E+G+RFAIREGG+TVG+GV+ SIIE
Sbjct:  310 AEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGATKL-----PDGMEMVMPGDNVTMEIDLIHPIAIEEGLRFAIREGGRTVGSGVVASIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THELT (Elongation factor Tu OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 58/93 (62.37%), Postives = 75/93 (80.65%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A+VYVLKKEEGGRH+PF  GYRPQF++RT DVTG ++ + N+    ++MVMPGD   + ++LI PVA E+GMRFAIREGG+TVGAGV+  I+E
Sbjct:  311 ANVYVLKKEEGGRHTPFMKGYRPQFFIRTADVTGEITELGNN----AEMVMPGDNAILTIKLIYPVAIEKGMRFAIREGGRTVGAGVVAEIVE 399          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SHEDO (Elongation factor Tu OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+  II
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIYPIAMDDGLRFAIREGGRTVGAGVVAKII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SHEAM (Elongation factor Tu OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+  I E
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIHE 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_PSEFS (Elongation factor Tu OS=Pseudomonas fluorescens (strain SBW25) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 62/93 (66.67%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG       +  E  +MVMPGD +KMVV LI  +A E G+RFAIREGG+TVGAGV+  IIE
Sbjct:  310 AEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIKMVVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 2
Query:    2 HASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            +A VYVLKKEEGGRH+ FF GYRPQF+ RTTDVTG V+       E  +MVMPGD V+ +VELI P+A E+ MRFAIREGGKTVGAGV+  IIE
Sbjct:  306 NAQVYVLKKEEGGRHTAFFNGYRPQFFFRTTDVTGTVTL-----KEGVEMVMPGDNVEFMVELISPIAMEKSMRFAIREGGKTVGAGVVTEIIE 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_MARAV (Elongation factor Tu OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 62/91 (68.13%), Postives = 69/91 (75.82%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVL KEEGGRH+PFF GYRPQFY RTTDVTG       +  E  +MVMPGD VKM V LI P+A E G+RFAIREGG+TVGAGV+  IIE
Sbjct:  313 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKMTVTLIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 398          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_MAGSA (Elongation factor Tu OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD VKM+V LI P+A +QG+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEAYILNKEEGGRHTPFFTNYRPQFYFRTTDVTGVVAL-----PEGTEMVMPGDNVKMIVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_LAWIP (Elongation factor Tu OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF+GYRPQFY RTTDVTG ++      +E  +MVMPGD     VELI P+A EQG+RFAIREGG+TVGAGV+  I+E
Sbjct:  310 AEVYVLSKEEGGRHTPFFSGYRPQFYCRTTDVTGVITL-----NEGVEMVMPGDNATFNVELIYPIAMEQGLRFAIREGGRTVGAGVVTEIVE 397          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BAUCH1.776e-2861.29Elongation factor Tu OS=Baumannia cicadellinicola ... [more]
EFTU_ALKOO1.776e-2865.59Elongation factor Tu OS=Alkaliphilus oremlandii (s... [more]
EFTU_THELT2.320e-2862.37Elongation factor Tu OS=Thermotoga lettingae (stra... [more]
EFTU_SHEDO2.320e-2865.22Elongation factor Tu OS=Shewanella denitrificans (... [more]
EFTU_SHEAM2.320e-2864.52Elongation factor Tu OS=Shewanella amazonensis (st... [more]
EFTU_PSEFS2.320e-2866.67Elongation factor Tu OS=Pseudomonas fluorescens (s... [more]
EFTU_METI42.320e-2867.02Elongation factor Tu OS=Methylacidiphilum infernor... [more]
EFTU_MARAV2.320e-2868.13Elongation factor Tu OS=Marinobacter aquaeolei (st... [more]
EFTU_MAGSA2.320e-2864.52Elongation factor Tu OS=Magnetospirillum magneticu... [more]
EFTU_LAWIP2.320e-2865.59Elongation factor Tu OS=Lawsonia intracellularis (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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