EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ACTPJ (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ACTP2 (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  307 SEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE
Sbjct:  313 AQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQL-----PEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_HAEI8 (Elongation factor Tu 2 OS=Haemophilus influenzae (strain 86-028NP) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A +QG+RFAIREGG+TVGAGV+  II+
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDQGLRFAIREGGRTVGAGVVAKIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPGD V + VELI P+A E+G++FAIREGG+TVGAGV+ +IIE
Sbjct:  313 AQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQL-----PEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_HAEI8 (Elongation factor Tu 1 OS=Haemophilus influenzae (strain 86-028NP) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.030e-28
Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD +KM V LI P+A +QG+RFAIREGG+TVGAGV+  II+
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDQGLRFAIREGGRTVGAGVVAKIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_XANOR (Elongation factor Tu OS=Xanthomonas oryzae pv. oryzae GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQ Y RTTD+TG +     D  E  +MVMPGD VKM V LI PVA ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEVYVLSKDEGGRHTPFFKGYRPQLYFRTTDITGAI-----DLPEGVEMVMPGDNVKMTVTLINPVAMDEGLRFAIREGGRTVGAGVVSKIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_XANOM (Elongation factor Tu OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF GYRPQ Y RTTD+TG +     D  E  +MVMPGD VKM V LI PVA ++G+RFAIREGG+TVGAGV+  II+
Sbjct:  309 AEVYVLSKDEGGRHTPFFKGYRPQLYFRTTDITGAI-----DLPEGVEMVMPGDNVKMTVTLINPVAMDEGLRFAIREGGRTVGAGVVSKIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_VIBVU (Elongation factor Tu OS=Vibrio vulnificus GN=tuf PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG +S       E  +MVMPGD ++MVVELI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  307 SEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDISL-----PEGVEMVMPGDNIQMVVELISPIAMDEGLRFAIREGGRTVGAGVVAKI 392          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THENN (Elongation factor Tu OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVLKKEEGGRH+PF  GY+PQFY+RT DVTG +  +     E  +MVMPGD V+M +ELI PVA E+G RFAIREGG+TVGAGV+  +IE
Sbjct:  312 AEVYVLKKEEGGRHTPFTKGYKPQFYIRTADVTGEIVGL----PEGVEMVMPGDHVEMEIELIYPVAIEKGQRFAIREGGRTVGAGVVTEVIE 400          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_ACTPJ3.030e-2863.44Elongation factor Tu OS=Actinobacillus pleuropneum... [more]
EFTU_ACTP23.030e-2863.44Elongation factor Tu OS=Actinobacillus pleuropneum... [more]
EFTU2_THETN3.030e-2865.59Elongation factor Tu-B OS=Thermoanaerobacter tengc... [more]
EFTU2_HAEI83.030e-2863.44Elongation factor Tu 2 OS=Haemophilus influenzae (... [more]
EFTU1_THETN3.030e-2865.59Elongation factor Tu-A OS=Thermoanaerobacter tengc... [more]
EFTU1_HAEI83.030e-2863.44Elongation factor Tu 1 OS=Haemophilus influenzae (... [more]
EFTU_XANOR3.957e-2864.52Elongation factor Tu OS=Xanthomonas oryzae pv. ory... [more]
EFTU_XANOM3.957e-2864.52Elongation factor Tu OS=Xanthomonas oryzae pv. ory... [more]
EFTU_VIBVU3.957e-2864.84Elongation factor Tu OS=Vibrio vulnificus GN=tuf P... [more]
EFTU_THENN3.957e-2864.52Elongation factor Tu OS=Thermotoga neapolitana (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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