EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_NITMU (Elongation factor Tu OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG +     +    ++MVMPGD V + V LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEIYVLSKEEGGRHTPFFQGYRPQFYFRTTDVTGAI-----ELPAGTEMVMPGDNVSVTVNLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG ++       E  +MVMPGD + M VELI PVA E  +RFAIREGG+TVG+GV+ SI+E
Sbjct:  308 VYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSIA-----LPEGVEMVMPGDHIDMNVELITPVAMENNLRFAIREGGRTVGSGVVTSIVE 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURVG (Elongation factor Tu OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURTA (Elongation factor Tu OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURS3 (Elongation factor Tu OS=Burkholderia sp. (strain 383) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURPS (Elongation factor Tu OS=Burkholderia pseudomallei GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURP6 (Elongation factor Tu OS=Burkholderia pseudomallei (strain 668) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURP1 (Elongation factor Tu OS=Burkholderia pseudomallei (strain 1710b) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURP0 (Elongation factor Tu OS=Burkholderia pseudomallei (strain 1106a) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BURMS (Elongation factor Tu OS=Burkholderia mallei (strain SAVP1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.957e-28
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  IIE
Sbjct:  309 AEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_NITMU3.957e-2863.44Elongation factor Tu OS=Nitrosospira multiformis (... [more]
EFTU_CLONN3.957e-2867.03Elongation factor Tu OS=Clostridium novyi (strain ... [more]
EFTU_BURVG3.957e-2867.74Elongation factor Tu OS=Burkholderia vietnamiensis... [more]
EFTU_BURTA3.957e-2867.74Elongation factor Tu OS=Burkholderia thailandensis... [more]
EFTU_BURS33.957e-2867.74Elongation factor Tu OS=Burkholderia sp. (strain 3... [more]
EFTU_BURPS3.957e-2867.74Elongation factor Tu OS=Burkholderia pseudomallei ... [more]
EFTU_BURP63.957e-2867.74Elongation factor Tu OS=Burkholderia pseudomallei ... [more]
EFTU_BURP13.957e-2867.74Elongation factor Tu OS=Burkholderia pseudomallei ... [more]
EFTU_BURP03.957e-2867.74Elongation factor Tu OS=Burkholderia pseudomallei ... [more]
EFTU_BURMS3.957e-2867.74Elongation factor Tu OS=Burkholderia mallei (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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