EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOLL (Elongation factor Tu 2 OS=Photorhabdus luminescens subsp. laumondii GN=tuf2 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD ++M V LI P+A +QG+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_PELTS (Elongation factor Tu 2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V        E  +MVMPGD V++ ++LI P+A E+G+RFAIREGG+TVGAGV+  I E
Sbjct:  313 AEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVK-----LPEGVEMVMPGDNVRIDIDLITPIAIEEGLRFAIREGGRTVGAGVVTGIRE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_RHOFD (Elongation factor Tu 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +YVL K+EGGRH+PFF  YRPQFY RTTDVTG +     +  E  +MVMPGD V ++V+LI P+A E+G+RFAIREGGKTVGAGV+  II
Sbjct:  311 IYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSIIVKLINPIAMEEGLRFAIREGGKTVGAGVVAKII 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOLL (Elongation factor Tu 1 OS=Photorhabdus luminescens subsp. laumondii GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD ++M V LI P+A +QG+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_PELTS (Elongation factor Tu 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V        E  +MVMPGD V++ ++LI P+A E+G+RFAIREGG+TVGAGV+  I E
Sbjct:  313 AEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVK-----LPEGVEMVMPGDNVRIDIDLITPIAIEEGLRFAIREGGRTVGAGVVTGIRE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_NITEC (Elongation factor Tu 1 OS=Nitrosomonas eutropha (strain C91) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.350e-27
Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL KEEGGRH+PFFAGYRPQFY RTTDVTG +     +     +MVMPGD + + V LI P+A  +G+RFAIREGG+TVGAGV+  +IE
Sbjct:  309 AEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVNVNLIAPIAMSEGLRFAIREGGRTVGAGVVAKVIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_STAAW (Elongation factor Tu OS=Staphylococcus aureus (strain MW2) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  307 AEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_STAAT (Elongation factor Tu OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  307 AEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_STAAS (Elongation factor Tu OS=Staphylococcus aureus (strain MSSA476) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  307 AEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_STAAR (Elongation factor Tu OS=Staphylococcus aureus (strain MRSA252) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  307 AEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_PHOLL3.350e-2760.87Elongation factor Tu 2 OS=Photorhabdus luminescens... [more]
EFTU2_PELTS3.350e-2764.52Elongation factor Tu 2 OS=Pelotomaculum thermoprop... [more]
EFTU1_RHOFD3.350e-2763.33Elongation factor Tu 1 OS=Rhodoferax ferrireducens... [more]
EFTU1_PHOLL3.350e-2760.87Elongation factor Tu 1 OS=Photorhabdus luminescens... [more]
EFTU1_PELTS3.350e-2764.52Elongation factor Tu 1 OS=Pelotomaculum thermoprop... [more]
EFTU1_NITEC3.350e-2761.29Elongation factor Tu 1 OS=Nitrosomonas eutropha (s... [more]
EFTU_STAAW4.375e-2763.44Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAT4.375e-2763.44Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAS4.375e-2763.44Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAR4.375e-2763.44Elongation factor Tu OS=Staphylococcus aureus (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
back to top