EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_HYPNA (Elongation factor Tu 2 OS=Hyphomonas neptunium (strain ATCC 15444) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E+ +MV+PGD VKM VELI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVKL-----PEDKEMVLPGDNVKMDVELINPIAMDKGLRFAIREGGRTVGAGVVSEI 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_RHIEC (Elongation factor Tu 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD V + VELI+P+A E+ +RFAIREGG+TVGAG++ SI+E
Sbjct:  304 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTL-----PEGTEMVMPGDNVTVDVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE 391          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOPR (Elongation factor Tu 1 OS=Photobacterium profundum GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + +YVL K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M V LI P+A ++G+RFAIREGG+TVGAGV+ +II
Sbjct:  307 SEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIAMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVATII 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_HYPNA (Elongation factor Tu 1 OS=Hyphomonas neptunium (strain ATCC 15444) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.375e-27
Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E+ +MV+PGD VKM VELI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVKL-----PEDKEMVLPGDNVKMDVELINPIAMDKGLRFAIREGGRTVGAGVVSEI 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_THEM4 (Elongation factor Tu OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVLKKEEGGRH+PF  GY+PQF++RT DVTG +       +    MVMPGD V+M ++LI PVA E+GMRFAIREGG+TVGAGV+ +I+E
Sbjct:  312 AQVYVLKKEEGGRHTPFQKGYKPQFFIRTADVTGELIEFPAGVE----MVMPGDNVEMTIKLIYPVAIEEGMRFAIREGGRTVGAGVVTAIVE 400          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHOS4 (Elongation factor Tu OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A  Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V        E ++MVMPGD +K  VELI P+A E+ +RFAIREGG+TVGAGV+  II
Sbjct:  304 AEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVQL-----PEGTEMVMPGDNLKFNVELIAPIAMEEKLRFAIREGGRTVGAGVVSKII 390          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHOS1 (Elongation factor Tu OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A  Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V        E ++MVMPGD +K  VELI P+A E+ +RFAIREGG+TVGAGV+  II
Sbjct:  304 AEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVQL-----PEGTEMVMPGDNLKFNVELIAPIAMEEKLRFAIREGGRTVGAGVVSKII 390          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHOPB (Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisB18) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHOP5 (Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisA53) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_RHOP2 (Elongation factor Tu OS=Rhodopseudomonas palustris (strain HaA2) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_HYPNA4.375e-2763.74Elongation factor Tu 2 OS=Hyphomonas neptunium (st... [more]
EFTU1_RHIEC4.375e-2762.37Elongation factor Tu 1 OS=Rhizobium etli (strain C... [more]
EFTU1_PHOPR4.375e-2760.87Elongation factor Tu 1 OS=Photobacterium profundum... [more]
EFTU1_HYPNA4.375e-2763.74Elongation factor Tu 1 OS=Hyphomonas neptunium (st... [more]
EFTU_THEM45.714e-2762.37Elongation factor Tu OS=Thermosipho melanesiensis ... [more]
EFTU_RHOS45.714e-2764.13Elongation factor Tu OS=Rhodobacter sphaeroides (s... [more]
EFTU_RHOS15.714e-2764.13Elongation factor Tu OS=Rhodobacter sphaeroides (s... [more]
EFTU_RHOPB5.714e-2763.44Elongation factor Tu OS=Rhodopseudomonas palustris... [more]
EFTU_RHOP55.714e-2763.44Elongation factor Tu OS=Rhodopseudomonas palustris... [more]
EFTU_RHOP25.714e-2763.44Elongation factor Tu OS=Rhodopseudomonas palustris... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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