EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BRAJA (Elongation factor Tu OS=Bradyrhizobium japonicum GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACSK (Elongation factor Tu OS=Bacillus clausii (strain KSM-K16) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 58/93 (62.37%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD  +M VELI P+A E+G RF+IREGG+TVG+GV+ +I E
Sbjct:  309 AEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNTEMTVELIAPIAIEEGTRFSIREGGRTVGSGVVSTITE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_BACP2 (Elongation factor Tu OS=Bacillus pumilus (strain SAFR-032) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V        E ++MVMPGD  +M VELI  +A E+G RF+IREGG+TVG+GV+ SII+
Sbjct:  309 AEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIV-----HLPEGTEMVMPGDNTEMEVELISTIAIEEGTRFSIREGGRTVGSGVVSSIIK 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_AZOC5 (Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD + + V+LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  310 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVTL-----PEGTEMVMPGDNISVDVQLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 397          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_ANOFW (Elongation factor Tu OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG +        E  +MVMPGD ++M VELI P+A E+G +F+IREGG+TVGAG +  IIE
Sbjct:  308 AQVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGIIQL-----PEGVEMVMPGDNIEMTVELIAPIAIEEGTKFSIREGGRTVGAGSVSEIIE 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPS (Elongation factor Tu 2 OS=Yersinia pseudotuberculosis GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPN (Elongation factor Tu 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_YERP3 (Elongation factor Tu 2 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_RHOPS (Elongation factor Tu 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BRASB5.714e-2763.44Elongation factor Tu OS=Bradyrhizobium sp. (strain... [more]
EFTU_BRAJA5.714e-2763.44Elongation factor Tu OS=Bradyrhizobium japonicum G... [more]
EFTU_BACSK5.714e-2762.37Elongation factor Tu OS=Bacillus clausii (strain K... [more]
EFTU_BACP25.714e-2764.52Elongation factor Tu OS=Bacillus pumilus (strain S... [more]
EFTU_AZOC55.714e-2762.37Elongation factor Tu OS=Azorhizobium caulinodans (... [more]
EFTU_ANOFW5.714e-2762.37Elongation factor Tu OS=Anoxybacillus flavithermus... [more]
EFTU2_YERPS5.714e-2759.78Elongation factor Tu 2 OS=Yersinia pseudotuberculo... [more]
EFTU2_YERPN5.714e-2759.78Elongation factor Tu 2 OS=Yersinia pestis bv. Anti... [more]
EFTU2_YERP35.714e-2759.78Elongation factor Tu 2 OS=Yersinia pseudotuberculo... [more]
EFTU2_RHOPS5.714e-2763.44Elongation factor Tu 2 OS=Rhodopseudomonas palustr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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