EY756251

Overview
NameEY756251
Unique NameEY756251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:702..1113. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU2_NITEC (Elongation factor Tu 2 OS=Nitrosomonas eutropha (strain C91) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A +YVL KEEGGRH+PFFAGYRPQFY RTTDVTG +     +     +MVMPGD + + V LI P+A   G+RFAIREGG+TVGAGV+  +IE
Sbjct:  309 AEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVNVNLIAPIAMSDGLRFAIREGGRTVGAGVVAKVIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPP (Elongation factor Tu 1 OS=Yersinia pestis (strain Pestoides F) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPE (Elongation factor Tu-A OS=Yersinia pestis GN=tufA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPA (Elongation factor Tu 1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG +     +  E  +MVMPGD + M+V LI P+A + G+RFAIREGG+TVGAGV+  +I
Sbjct:  307 SEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU1_RHOPS (Elongation factor Tu 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.714e-27
Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            A  Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE
Sbjct:  309 AEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 283
            VYVL KEEGGRH+PFF GYRPQFY RTTDVTG     +    E ++MVMPGD V + VELI PVA ++G+RFAIREGG+TVGAG +  I++
Sbjct:  310 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTG-----VAQLPEGTEMVMPGDNVSLEVELITPVAMDKGLRFAIREGGRTVGAGTVTEILK 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_PSYA2 (Elongation factor Tu OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            A VYVL KEEGGRH+PF  GYRPQFY RTTDVTG +        + ++MVMPGD V+M VELI P+A ++G+RFAIREGG+TVGAGV+ ++
Sbjct:  309 AEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQL-----QDGTEMVMPGDNVEMGVELIHPIAMDKGLRFAIREGGRTVGAGVVANV 394          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_POLSQ (Elongation factor Tu OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 60/92 (65.22%), Postives = 72/92 (78.26%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            A VY+L K+EGGRH+PFF  YRPQFY RTTDVTG   SI   KD+E  MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+  I+
Sbjct:  309 AEVYILGKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVTITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIL 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 2
Query:   11 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 280
            +YVL K+EGGRH+PFF  YRPQFY RTTDVTG +     +  E  +MVMPGD V + V+LI P+A E+G+RFAIREGGKTVGAGV+  II
Sbjct:  311 IYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGKTVGAGVVAKII 395          
BLAST of EY756251 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.463e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 ASVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 277
            ASVY+L KEEGGRH+PFF  YRPQFY RTTDVTG V+       E ++MVMPGD  +M VELI P+A ++G+RFAIREGG+TVGAG +  I
Sbjct:  310 ASVYILSKEEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMAVELIQPIAMDEGLRFAIREGGRTVGAGRVTKI 395          
The following BLAST results are available for this feature:
BLAST of EY756251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_NITEC5.714e-2761.29Elongation factor Tu 2 OS=Nitrosomonas eutropha (s... [more]
EFTU1_YERPP5.714e-2759.78Elongation factor Tu 1 OS=Yersinia pestis (strain ... [more]
EFTU1_YERPE5.714e-2759.78Elongation factor Tu-A OS=Yersinia pestis GN=tufA ... [more]
EFTU1_YERPA5.714e-2759.78Elongation factor Tu 1 OS=Yersinia pestis bv. Anti... [more]
EFTU1_RHOPS5.714e-2763.44Elongation factor Tu 1 OS=Rhodopseudomonas palustr... [more]
EFTU_SOLUE7.463e-2763.74Elongation factor Tu OS=Solibacter usitatus (strai... [more]
EFTU_PSYA27.463e-2762.64Elongation factor Tu OS=Psychrobacter arcticus (st... [more]
EFTU_POLSQ7.463e-2765.22Elongation factor Tu OS=Polynucleobacter sp. (stra... [more]
EFTU_POLSJ7.463e-2763.33Elongation factor Tu OS=Polaromonas sp. (strain JS... [more]
EFTU_NOCSJ7.463e-2763.74Elongation factor Tu OS=Nocardioides sp. (strain B... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756251 ID=EY756251; Name=EY756251; organism=Citrus sinensis; type=EST; length=412bp
CCACGCGTCCGTGTATGTGTTGAAGAAGGAAGAAGGTGGTAGGCACTCAC
CTTTCTTTGCGGGTTACAGGCCTCAATTTTACATGAGGACCACTGATGTG
ACTGGAAGGGTGTCTTCTATTATGAACGACAAGGACGAGGAGTCCAAGAT
GGTTATGCCTGGCGACCGTGTCAAGATGGTTGTGGAGCTTATTATGCCAG
TGGCTTGTGAGCAAGGGATGAGATTTGCCATCAGAGAAGGAGGAAAGACT
GTTGGAGCTGGTGTTATTCAGTCCATCATTGAATGATAGTACTAGGAACT
TTCATGGGCAGTGGATTATCTTTTACTTTTTTGAGCGGTGTTAAACTTCA
TATTCTTAAGTTTTTATGGAATTAGTTTCACCATTCTAGGAAAAAAAAAA
AAAAAAAAAAAA
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