EY756186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_RAT (40S ribosomal protein S4, X isoform OS=Rattus norvegicus GN=Rps4x PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_MOUSE (40S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_MESAU (40S ribosomal protein S4, X isoform OS=Mesocricetus auratus GN=RPS4X PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_MACFU (40S ribosomal protein S4, X isoform OS=Macaca fuscata fuscata GN=RPS4X PE=2 SV=3) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_HUMAN (40S ribosomal protein S4, X isoform OS=Homo sapiens GN=RPS4X PE=1 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_FELCA (40S ribosomal protein S4, X isoform OS=Felis catus GN=RPS4X PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_CERAE (40S ribosomal protein S4, X isoform OS=Cercopithecus aethiops GN=RPS4X PE=2 SV=3) HSP 1 Score: 51.2174 bits (121), Expect = 5.531e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.817 bits (94), Expect = 5.531e-12 Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 98 NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_CAEEL (40S ribosomal protein S4 OS=Caenorhabditis elegans GN=rps-4 PE=1 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 7.189e-12 Identity = 29/76 (38.16%), Postives = 38/76 (50.00%), Query Frame = 2 Query: 287 TGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLK 514 TG II E G+ + IHI+D+ GH AT + +VF I G + +S P G I LS EE KR + K Sbjct: 183 TGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKRMAQK 258 HSP 2 Score: 43.8986 bits (102), Expect = 7.189e-12 Identity = 27/74 (36.49%), Postives = 36/74 (48.65%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 +LYDT GR + + EA FKLC V+SV+ + P+ T DGRTI Y T IT+ +K Sbjct: 100 MLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVK 173
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_ICTPU (40S ribosomal protein S4 OS=Ictalurus punctatus GN=rps4 PE=2 SV=3) HSP 1 Score: 52.7582 bits (125), Expect = 9.326e-12 Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D+ G+ AT L ++F I G + +S P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 38.5058 bits (88), Expect = 9.326e-12 Identity = 24/77 (31.17%), Postives = 32/77 (41.56%), Query Frame = 3 Query: 27 NSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 N L+YD GR + +EA +KLC V+ + + P T D RTI Y +T IT IK Sbjct: 98 NFRLIYDVKGRFTVHRITNEEAKYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_CHICK (40S ribosomal protein S4 OS=Gallus gallus GN=RPS4 PE=2 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 9.326e-12 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 40.0466 bits (92), Expect = 9.326e-12 Identity = 25/74 (33.78%), Postives = 33/74 (44.59%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 101 LVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174 The following BLAST results are available for this feature:
BLAST of EY756186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756186 ID=EY756186; Name=EY756186; organism=Citrus sinensis; type=EST; length=825bpback to top |