EY756182

Overview
NameEY756182
Unique NameEY756182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12994 contig Csv1_Contig12994:407..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 31/93 (33.33%), Postives = 57/93 (61.29%), Query Frame = 2
Query:   68 RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 343
            ++ P   R++V+++   +KT  G+ +P+    K + GKV+AVG G    +GK  P+ +K GDT+L  +Y G E+KL  +++ +  +E +LG +
Sbjct:    2 KIRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVI 94          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_METI4 (10 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 2
Query:   68 RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 343
            ++ P   RVLV+ I        GI++P+    K     V+AVGPG  D NGK IP+ VK+GD VL+ +YGG EVK+  + + +  ++ IL  +
Sbjct:    5 KIRPLGERVLVKLIEEQEVRKGGIIIPDTAKEKPQEATVIAVGPGKLDENGKRIPIEVKKGDKVLISKYGGTEVKIDGESFQILREDDILAII 97          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 2
Query:   71 LIPAFSRVLVEKIIPPSKTNSGILLPEKTSKLIS-GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 343
            L P   RVLV+++    KT  G+ +P+   +  S G+VVAVGPG    +GK IP++VK GDTVL  +Y G EVKL   ++ +  ++ IL  +
Sbjct:    3 LKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 2
Query:   71 LIPAFSRVLVEKIIPPSKTNSGILLPEKTSKLIS-GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 343
            L P   RVLV+++    KT  G+ +P+   +  S G+VVAVGPG    +GK IP++VK GDTVL  +Y G EVKL   ++ +  ++ IL  +
Sbjct:    3 LKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 2
Query:   68 RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 343
            +L P   R++V+++   +KT  GI +PE    K + G+VVAVG G R  +GK +P+ VK GD VL  +Y G E+K+  + + +  ++ ILG +
Sbjct:    2 KLRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVI 94          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_DICDI (10 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspe1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 2
Query:   65 KRLIPAFSRVLVEKII-PPSKTNSGILLP-EKTSKLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLL-PEYGGAEVKLGDKKYHLYEDESILGTLHD 349
            K+ IP   R+LVEKI    +KT+ GI +P  K +   + KV+AVG G+  ++G FI   VKEGD VL+ P+     V  GDK YHL  +  ILG + +
Sbjct:    5 KKFIPLLDRILVEKISNQATKTSGGIFIPTNKDAPTNNAKVIAVGTGSVKLDGSFIDPIVKEGDIVLINPKARSNTVPWGDKTYHLLSENDILGIIEN 102          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_BRUSU (10 kDa chaperonin OS=Brucella suis GN=groS PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   77 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 337
            P   RV+V ++   +KT  GI++P+    K   G+VVA G GARD  GK +P+ VK GD VL  ++ G EVK+G +   + ++  ILG
Sbjct:    8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_BRUSI (10 kDa chaperonin OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   77 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 337
            P   RV+V ++   +KT  GI++P+    K   G+VVA G GARD  GK +P+ VK GD VL  ++ G EVK+G +   + ++  ILG
Sbjct:    8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_BRUME (10 kDa chaperonin OS=Brucella melitensis GN=groS PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   77 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 337
            P   RV+V ++   +KT  GI++P+    K   G+VVA G GARD  GK +P+ VK GD VL  ++ G EVK+G +   + ++  ILG
Sbjct:    8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95          
BLAST of EY756182 vs. ExPASy Swiss-Prot
Match: CH10_BRUMB (10 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groS PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   77 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 337
            P   RV+V ++   +KT  GI++P+    K   G+VVA G GARD  GK +P+ VK GD VL  ++ G EVK+G +   + ++  ILG
Sbjct:    8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95          
The following BLAST results are available for this feature:
BLAST of EY756182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CH10_MYXXD1.339e-1133.3310 kDa chaperonin OS=Myxococcus xanthus (strain DK... [more]
CH10_METI41.339e-1138.7110 kDa chaperonin OS=Methylacidiphilum infernorum ... [more]
CH10_LAWIP1.339e-1141.3010 kDa chaperonin OS=Lawsonia intracellularis (str... [more]
CH10_LAWIN1.339e-1141.3010 kDa chaperonin OS=Lawsonia intracellularis GN=g... [more]
CH10_GEOUR1.339e-1137.6310 kDa chaperonin OS=Geobacter uraniireducens (str... [more]
CH10_DICDI1.339e-1142.8610 kDa heat shock protein, mitochondrial OS=Dictyo... [more]
CH10_BRUSU1.339e-1140.9110 kDa chaperonin OS=Brucella suis GN=groS PE=2 SV... [more]
CH10_BRUSI1.339e-1140.9110 kDa chaperonin OS=Brucella suis (strain ATCC 23... [more]
CH10_BRUME1.339e-1140.9110 kDa chaperonin OS=Brucella melitensis GN=groS P... [more]
CH10_BRUMB1.339e-1140.9110 kDa chaperonin OS=Brucella melitensis biotype 2... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-F01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756182 ID=EY756182; Name=EY756182; organism=Citrus sinensis; type=EST; length=619bp
CCACGCGTCCGGAAGAAAGTTTTGGTGAAGTCCCCTCCTGTTTGTTCGTG
AAGAGAAAATGGCAAAGAGATTGATTCCAGCATTCAGTCGCGTTTTGGTT
GAAAAAATAATCCCTCCTTCCAAAACCAACTCCGGAATCTTACTTCCTGA
GAAAACAAGCAAGCTGATTTCTGGAAAAGTTGTTGCTGTGGGTCCTGGAG
CTCGTGATGTCAATGGAAAGTTTATTCCTGTAAGTGTGAAGGAAGGAGAT
ACTGTTCTTTTGCCCGAGTATGGGGGGGCTGAAGTTAAGCTTGGTGATAA
AAAGTACCATCTGTACGAGGATGAGTCCATCCTGGGAACACTTCATGACC
ATTGAAAAATATTGCTCTTTGATTGCATCTAGTAATGGCAGCTTTAATAA
TTCAAAGTTGTCGGCTGGAGCAGCCTTGTGACTGAATATTAGTGCTATAT
ACATTTAAACTTATTTAGGACTTGAGAAGTGTTTTCATATAACTTGATGT
ACTAGTTCAGAAACTAATTTGCGACTGAGAATTGCTAAGAATTGCTAAGG
GCTGCAGTTTATAGCGCATTATTCGAAGTGNNCCTTGGTCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
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