EY756180

Overview
NameEY756180
Unique NameEY756180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:700..1155. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756180 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.318e-12
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   25 WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMA-LAEEEFTWFLDKDATSKL 258
            WVTF+ DS KPPPERITFT PVINS+A + +V  G  K++A+  A+ +     +S  LP ++   +     WF+DK A SKL
Sbjct:  180 WVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKL 261          
BLAST of EY756180 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.249e-12
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   25 WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAL-AEEEFTWFLDKDATSKL 258
            WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:  201 WVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of EY756180 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 2.249e-12
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:   25 WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAL-AEEEFTWFLDKDATSKL 258
            WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:  201 WVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
The following BLAST results are available for this feature:
BLAST of EY756180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
6PGL1_ARATH1.318e-1246.34Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ2.249e-1246.34Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI2.249e-1246.34Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756180 ID=EY756180; Name=EY756180; organism=Citrus sinensis; type=EST; length=456bp
CCACGCGTCCGAGGAGAATTGACATGGGTTACTTTCATTAAAGACTCGCC
AAAGCCACCTCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCAT
CTGCATATATTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTT
CAAACTGCATTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAAT
GGCATTGGCTGAAGAAGAATTCACTTGGTTTCTTGACAAAGACGCGACTT
CAAAGCTGTAAGAGTCAGAACAATTTGCTGTATGCATGAATCCCTGTTAT
CTGCTATGATAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTG
GATTTTGTTAGTAATGAGAACAGAGTGAACTTGTTAATGCAAGTGAAAAA
GATTTGAATAAATATAGTTTGATATTTTAATAAAAAAAAAAAAAAAAAAA
AAAAAA
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