EY756169

Overview
NameEY756169
Unique NameEY756169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13310 contig Csv1_Contig13310:1..439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_LITVA (Histone H4 OS=Litopenaeus vannamei PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.750e-24
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKR   TLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRXXXTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_TRICD (Histone H4 OS=Trichogramma cacoeciae PE=3 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 2.286e-24
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS LIYEETRGVLK+FL+NVIRDAVTYTEHA+  TVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISSLIYEETRGVLKVFLENVIRDAVTYTEHAKIPTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_USTMA (Histone H4 OS=Ustilago maydis GN=HHF1 PE=3 SV=4)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 52/64 (81.25%), Postives = 60/64 (93.75%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 196
            A  GG  RISGLIY+ETRGVLK+FL++VIRD+VTYTEHA+RKTVT++DVVYALKRQGRTLYGFG
Sbjct:   39 ARRGGVKRISGLIYDETRGVLKLFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFG 102          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_NEUCR (Histone H4 OS=Neurospora crassa GN=hhf-1 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL+ VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_ASPOR (Histone H4 OS=Aspergillus oryzae GN=hhfA PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL+ VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_ASPFU (Histone H4 OS=Aspergillus fumigatus GN=hhfA PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL+ VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H42_PENFN (Histone H4.2 OS=Penicillium funiculosum GN=H4.2 PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL++VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H42_EMENI (Histone H4.2 OS=Emericella nidulans GN=hhfB PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL++VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H41_PENFN (Histone H4.1 OS=Penicillium funiculosum GN=H4.1 PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL+ VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H41_EMENI (Histone H4.1 OS=Emericella nidulans GN=hhfA PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 6.650e-24
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS +IYEETRGVLK FL+ VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISAMIYEETRGVLKTFLEGVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
The following BLAST results are available for this feature:
BLAST of EY756169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_LITVA1.750e-2484.62Histone H4 OS=Litopenaeus vannamei PE=1 SV=2[more]
H4_TRICD2.286e-2484.62Histone H4 OS=Trichogramma cacoeciae PE=3 SV=3[more]
H4_USTMA6.650e-2481.25Histone H4 OS=Ustilago maydis GN=HHF1 PE=3 SV=4[more]
H4_NEUCR6.650e-2481.54Histone H4 OS=Neurospora crassa GN=hhf-1 PE=3 SV=2[more]
H4_ASPOR6.650e-2481.54Histone H4 OS=Aspergillus oryzae GN=hhfA PE=3 SV=3[more]
H4_ASPFU6.650e-2481.54Histone H4 OS=Aspergillus fumigatus GN=hhfA PE=3 S... [more]
H42_PENFN6.650e-2481.54Histone H4.2 OS=Penicillium funiculosum GN=H4.2 PE... [more]
H42_EMENI6.650e-2481.54Histone H4.2 OS=Emericella nidulans GN=hhfB PE=3 S... [more]
H41_PENFN6.650e-2481.54Histone H4.1 OS=Penicillium funiculosum GN=H4.1 PE... [more]
H41_EMENI6.650e-2481.54Histone H4.1 OS=Emericella nidulans GN=hhfA PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756169 ID=EY756169; Name=EY756169; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAGGCTTTACGAGAATCAGCGGTCTCATCTACGAGG
AGACACGCGGCGTCCTCAAGATCTTCTTGGACAACGTCATTCGCGATGCT
GTGACCTACACTGAGCACGCTCGCCGAAAGACGGTGACCGCCATGGATGT
CGTTTATGCGCTCAAGAGGCAGGGCAGGACTCTCTATGGGTTTGGTGGTT
GATGTGGCGTCGTTTTGTATTTTGTGTTTTAGGATTTTCCTTTTTTCCTG
TAAATCAGTGAATGTGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCA
ACTTGTATTTGCCGTTTCCTAGGGGTTTTTTTATTTTTTTGGTTCATTGG
TGTTTTCATCTTTGCAATGAGAATCTAGTTGTTTACTTCNNAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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