EY756107

Overview
NameEY756107
Unique NameEY756107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3659 contig Csv1_Contig3659:301..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.478e-31
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.478e-31
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.930e-31
Identity = 66/70 (94.29%), Postives = 70/70 (100.00%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.521e-31
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.293e-31
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.300e-31
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.300e-31
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.300e-31
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.300e-31
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.251e-30
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 3 
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY756107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
UBIQ_CAMDR1.478e-3195.71Ubiquitin OS=Camelus dromedarius PE=3 SV=2[more]
UBIQ_BOVIN1.478e-3195.71Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1[more]
UBIQ_TETPY1.930e-3194.29Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]
UBIQ_SHEEP2.521e-3194.29Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2[more]
UBIQ_EIMBO3.293e-3194.29Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_TRYBB4.300e-3194.29Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1[more]
UBIQ_STRPU4.300e-3194.29Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_ENCCU4.300e-3194.29Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_DICDI4.300e-3194.29Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_PHYIN1.251e-3092.86Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756107 ID=EY756107; Name=EY756107; organism=Citrus sinensis; type=EST; length=442bp
CCACGCGTCCGGATCTTCGTCACACGTTGACCGGGAAGACGATCACCCTG
GAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCCAAGATCCAGGA
CAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGC
AGCTCGAGGATGGCCGGACTCTCGCCGATTACAACATTCAAAAGGAGTCC
ACTCTCCACCTTGTCCTCCGTCTCCGTGGTGGTGACTTCTAAAAAAATAA
ATGTGGATGTGTCCGCGTTTGATTGGATGGCGCTAATAATAATTAATTAG
GTTGGATTGGGCGCTTTGCTTTAATTATTTTGTAATTACAATTGTGTAAT
GGCCAGCCGCTTGGGCCTAATTTCCTCTTTCTATTGGTAATAATAATATA
AGCACTAGTTTTTAAATNNNAAAAAAAAAAAAAAAAAAAAAA
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