EY756107

Overview
NameEY756107
Unique NameEY756107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3659 contig Csv1_Contig3659:301..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.634e-30
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.257e-29
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    7 TLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.885e-27
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3
Query:   39 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 227
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.067e-25
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGD 236
            TLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG+
Sbjct:    7 TLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGGN 77          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.340e-24
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    7 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.609e-20
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGD 236
            TLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGGD
Sbjct:    7 TLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGD 77          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.937e-20
Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    7 TLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.298e-19
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    7 TLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.298e-19
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    7 TLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
BLAST of EY756107 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.298e-19
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 3
Query:   24 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 233
            TLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    7 TLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76          
The following BLAST results are available for this feature:
BLAST of EY756107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
UBIQ_LEIMA1.634e-3092.86Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1[more]
UBIQ_LEITA5.257e-2990.00Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3... [more]
UBIQ_LUMTE2.885e-2795.24Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ... [more]
UBIL_NPVOP2.067e-2577.46Ubiquitin-like protein OS=Orgyia pseudotsugata mul... [more]
UBIL_NPVAC1.340e-2475.71Ubiquitin-like protein OS=Autographa californica n... [more]
NEDD8_DROME7.609e-2059.15NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=... [more]
RUB1_DESAN9.937e-2064.29NEDD8-like protein RUB1 OS=Deschampsia antarctica ... [more]
RUB2_ORYSJ1.298e-1962.86NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap... [more]
RUB1_ORYSJ1.298e-1962.86NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap... [more]
RUB1_ARATH1.298e-1962.86NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756107 ID=EY756107; Name=EY756107; organism=Citrus sinensis; type=EST; length=442bp
CCACGCGTCCGGATCTTCGTCACACGTTGACCGGGAAGACGATCACCCTG
GAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCCAAGATCCAGGA
CAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGC
AGCTCGAGGATGGCCGGACTCTCGCCGATTACAACATTCAAAAGGAGTCC
ACTCTCCACCTTGTCCTCCGTCTCCGTGGTGGTGACTTCTAAAAAAATAA
ATGTGGATGTGTCCGCGTTTGATTGGATGGCGCTAATAATAATTAATTAG
GTTGGATTGGGCGCTTTGCTTTAATTATTTTGTAATTACAATTGTGTAAT
GGCCAGCCGCTTGGGCCTAATTTCCTCTTTCTATTGGTAATAATAATATA
AGCACTAGTTTTTAAATNNNAAAAAAAAAAAAAAAAAAAAAA
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