EY756103

Overview
NameEY756103
Unique NameEY756103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length297
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13304 contig Csv1_Contig13304:1..299. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.284e-14
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 3
Query:    3 RRPTRPRYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            R   +   LT EK  SPGEE DKVF+AICQGK+IDPLLECL+EW+G+P+PI
Sbjct:  569 REELKTSLLTGEKVRSPGEEFDKVFSAICQGKVIDPLLECLREWNGAPIPI 619          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.284e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            YLT EK  SPGEECDKVF AICQGKIIDP+L CL+ W+G+PLPI
Sbjct:  191 YLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGAPLPI 234          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.284e-14
Identity = 31/45 (68.89%), Postives = 41/45 (91.11%), Query Frame = 3
Query:   21 RYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            + LT EK +SPGEE DKVFTA+C+GK+IDPL++CLKEW+G+P+PI
Sbjct:  672 KLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPI 716          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTA+CQGKIIDP+LECL EW+GSPLPI
Sbjct:  672 LTGEKVQSPGEEFDKVFTAMCQGKIIDPMLECLGEWNGSPLPI 714          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            +LT EK +SPGEE DKVF AIC+GK IDP+L+CLKEW+G+PLPI
Sbjct:  659 FLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGAPLPI 702          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEECDKVFTA+C G+IID LLECLKEW+G+PLPI
Sbjct:  669 LTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPI 711          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEECDKVFTA+C G+IID LLECLKEW+G+PLPI
Sbjct:  669 LTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGAPLPI 711          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14
Identity = 34/43 (79.07%), Postives = 36/43 (83.72%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGE CDKVFTA+C G IIDPLLECLK WDG+PLPI
Sbjct:  665 LTGEKVKSPGEVCDKVFTAVCDGGIIDPLLECLKSWDGAPLPI 707          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.602e-14
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTA+C+GK+IDP+LECLKEW+G+PLPI
Sbjct:  677 LTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEWNGAPLPI 719          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.602e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DK+FTAICQGKIIDPLLECL EW+G+PLPI
Sbjct:  463 LTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGAPLPI 505          
The following BLAST results are available for this feature:
BLAST of EY756103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PALY_PERAE3.284e-1466.67Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PALY_MALDO3.284e-1477.27Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PAL2_ARATH3.284e-1468.89Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PALY_POPTR4.289e-1481.40Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_BROFI4.289e-1472.73Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL3_TOBAC4.289e-1479.07Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC4.289e-1479.07Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_IPOBA4.289e-1479.07Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PALY_CITLI5.602e-1476.74Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_PHAVU5.602e-1481.40Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756103 ID=EY756103; Name=EY756103; organism=Citrus sinensis; type=EST; length=297bp
TTCGTCGACCCACGCGTCCGCGGTATCTGACACGAGAGAAGGCGATATCA
CCAGGCGAGGAATGTGATAAGGTGTTTACAGCGATTTGTCAGGGAAAAAT
AATTGATCCACTGCTTGAATGTCTTAAAGAATGGGATGGGAGTCCTCTTC
CAATTTGTTAATGCTTTCTTTTATGCCTTTTTTTTTATATATATTTTAAT
GTCGCTTGGAAGGTTAACAAATATAATTCTTCTACTGTGAGGATAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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