EY756103

Overview
NameEY756103
Unique NameEY756103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length297
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13304 contig Csv1_Contig13304:1..299. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.555e-14
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTAIC+GKIIDP++ECL EW+G+P+PI
Sbjct:  682 LTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPI 724          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.248e-13
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTAIC G+IIDPLLECLK W+G+PLPI
Sbjct:  661 LTGEKVRSPGEEIDKVFTAICNGQIIDPLLECLKSWNGAPLPI 703          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.248e-13
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEEC KVF AIC GK++DPLLECLKEW+G+PLPI
Sbjct:  667 LTGEKIKSPGEECYKVFNAICAGKLVDPLLECLKEWNGAPLPI 709          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.630e-13
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEECDKVF A+C G+ IDP+L+CLKEW+G+PLPI
Sbjct:  675 LTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGAPLPI 717          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.630e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGE+ DKVFTAIC GK++DPLLECLKEW+G+PLPI
Sbjct:  639 LTGEKVKSPGEDFDKVFTAICAGKLMDPLLECLKEWNGAPLPI 681          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.129e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DK+FTA+CQGKIIDPL+ECL EW+G+PLPI
Sbjct:  670 LTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGAPLPI 712          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.742e-13
Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTA+C+G++IDPL++CLKEW+G+PLPI
Sbjct:  671 LTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGAPLPI 713          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.742e-13
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 3
Query:    3 RRPTRPRYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            R+      LT EK  SPGEE DKVFTA C G+IIDPLLECLK W+G+P+PI
Sbjct:  670 RQEVGTELLTGEKVRSPGEEIDKVFTAFCNGQIIDPLLECLKSWNGAPIPI 720          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.089e-13
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            +LT EK  SPGEEC+KVF  I QGK+IDP+L+CLKEW+G PLPI
Sbjct:  657 FLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNGEPLPI 700          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.802e-12
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGE+ DKVFTA+C+GKIIDPLL+CL  W+G+PLPI
Sbjct:  373 LTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGAPLPI 415          
The following BLAST results are available for this feature:
BLAST of EY756103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PAL1_ARATH9.555e-1474.42Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PAL1_SOLLC1.248e-1379.07Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL1_RUBID1.248e-1376.74Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL2_CICAR1.630e-1372.09Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_POPKI1.630e-1376.74Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PAL1_SOYBN2.129e-1376.74Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PALY_CAMSI4.742e-1372.09Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL5_SOLLC4.742e-1364.71Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL1_ORYSJ8.089e-1370.45Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_VITVI1.802e-1272.09Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756103 ID=EY756103; Name=EY756103; organism=Citrus sinensis; type=EST; length=297bp
TTCGTCGACCCACGCGTCCGCGGTATCTGACACGAGAGAAGGCGATATCA
CCAGGCGAGGAATGTGATAAGGTGTTTACAGCGATTTGTCAGGGAAAAAT
AATTGATCCACTGCTTGAATGTCTTAAAGAATGGGATGGGAGTCCTCTTC
CAATTTGTTAATGCTTTCTTTTATGCCTTTTTTTTTATATATATTTTAAT
GTCGCTTGGAAGGTTAACAAATATAATTCTTCTACTGTGAGGATAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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