EY756103

Overview
NameEY756103
Unique NameEY756103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length297
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13304 contig Csv1_Contig13304:1..299. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12
Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 3
Query:   21 RYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            R LT EKA+SP EE +KV+TA+CQ KIIDP+LECL++W+G P+PI
Sbjct:  666 RLLTGEKALSPDEEFEKVYTAMCQAKIIDPILECLEDWNGVPIPI 710          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE DKVFTA+C+GK++DPLL CL+ W+G+PLPI
Sbjct:  667 LTGEKVRSPGEELDKVFTAMCEGKLVDPLLACLEAWNGAPLPI 709          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.074e-12
Identity = 29/44 (65.91%), Postives = 39/44 (88.64%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            +LT EK +SPGEECD+VFTA+ +G I+DPLL+CL+ W+G+PLPI
Sbjct:  669 FLTGEKVMSPGEECDRVFTAMSKGLIVDPLLKCLEGWNGAPLPI 712          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.243e-12
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            YLT EK  SPGEE +KVFTA+ +G+IIDPLLECL+ W+G+PLPI
Sbjct:  674 YLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGAPLPI 717          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.243e-12
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            YLT EK  SPGEE DKVF A+ +G+IIDPLLECL+ W+G+PLPI
Sbjct:  672 YLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGAPLPI 715          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.243e-12
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 3
Query:   27 LTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            LT EK  SPGEE +KVFTA+C G+I DPLLECLK W+G+PLPI
Sbjct:  677 LTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGAPLPI 719          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.243e-12
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 3
Query:   24 YLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            YLT EK  SPGEE DKVFTA+ +G+IIDPLL CL+ W+G+PLPI
Sbjct:  664 YLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGAPLPI 707          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.848e-12
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 3
Query:    3 RRPTRPRYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            R+     YLT EK  SPGEE DKVF A+ QGK ID LLECLKEW+G PLP+
Sbjct:  649 RKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPL 699          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.943e-12
Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 3
Query:   21 RYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            +YLT EK  SPGEE +KV  AI +GK IDPLLECLKEW+G PLPI
Sbjct:  668 KYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPI 712          
BLAST of EY756103 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.943e-12
Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 3
Query:   21 RYLTREKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPI 155
            +YLT EK  SPGEE +KV  AI +GK IDPLLECLKEW+G PLPI
Sbjct:  668 KYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPI 712          
The following BLAST results are available for this feature:
BLAST of EY756103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PAL3_PHAVU2.353e-1266.67Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL1_LITER2.353e-1269.77Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PALY_DIGLA3.074e-1265.91Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL3_PETCR5.243e-1270.45Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL2_PETCR5.243e-1270.45Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL1_SOLTU5.243e-1272.09Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL1_DAUCA5.243e-1270.45Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_WHEAT6.848e-1264.71Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL2_ORYSJ8.943e-1271.11Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI8.943e-1271.11Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756103 ID=EY756103; Name=EY756103; organism=Citrus sinensis; type=EST; length=297bp
TTCGTCGACCCACGCGTCCGCGGTATCTGACACGAGAGAAGGCGATATCA
CCAGGCGAGGAATGTGATAAGGTGTTTACAGCGATTTGTCAGGGAAAAAT
AATTGATCCACTGCTTGAATGTCTTAAAGAATGGGATGGGAGTCCTCTTC
CAATTTGTTAATGCTTTCTTTTATGCCTTTTTTTTTATATATATTTTAAT
GTCGCTTGGAAGGTTAACAAATATAATTCTTCTACTGTGAGGATAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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