EY756099

Overview
NameEY756099
Unique NameEY756099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2700 contig Csv1_Contig2700:603..1275. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756099 vs. ExPASy Swiss-Prot
Match: PARP1_CHICK (Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   12 ELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 254
            ELK A ++ K P GKHS KGLGKT P  +      D V VP G    + +  + L+YNEYIVY+ AQV +++LLK++F++K
Sbjct:  928 ELKNASHITKLPKGKHSVKGLGKTAPDPTATTTL-DGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNYK 1007          
BLAST of EY756099 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   12 ELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 254
            E   AKY+ K P+ KHS  G G+T+P  S+ +   D V +P GKP  ++   S L+YNE+I+Y+ AQV +Q++L++ F +K
Sbjct:  916 ECTAAKYVTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKYK 996          
BLAST of EY756099 vs. ExPASy Swiss-Prot
Match: PARP3_ARATH (Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 3
Query:   48 DGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 254
            D K   KGLG+   +ES+   WRDD+ VPCG+  PS  + S L YNEY VY+  Q  ++FL++V++  K
Sbjct:  737 DKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRLVPSEHKDSPLEYNEYAVYDPKQTSIRFLVEVKYEEK 805          
BLAST of EY756099 vs. ExPASy Swiss-Prot
Match: PRP2B_ORYSJ (Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica GN=PARP2-B PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 3
Query:   36 DKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPAPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 254
            D  P+GK STKG+G+T P  ++     D + +P GKP     R   LMYNEYIVYN  Q++M+++L V F+ K
Sbjct:  530 DNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSRRGSLMYNEYIVYNVDQIRMRYILNVNFNFK 602          
The following BLAST results are available for this feature:
BLAST of EY756099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PARP1_CHICK2.177e-1346.91Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN... [more]
PARP_SARPE3.713e-1341.98Poly [ADP-ribose] polymerase OS=Sarcophaga peregri... [more]
PARP3_ARATH1.195e-1144.93Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thal... [more]
PRP2B_ORYSJ2.038e-1145.21Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756099 ID=EY756099; Name=EY756099; organism=Citrus sinensis; type=EST; length=673bp
CCACGCGTCCGGAGCTCAAGAAGGCGAAGTATATGGATAAACCACCTGAT
GGGAAGCACTCCACTAAAGGACTTGGCAAGACTGTACCACAGGAATCTGA
TTTTGTGAAGTGGAGAGATGATGTCACTGTGCCATGTGGAAAACCAGCAC
CTTCAAATGTCAGGGCTTCTGAGCTGATGTACAATGAATACATTGTTTAT
AATACTGCTCAAGTTAAGATGCAGTTCCTGTTGAAGGTGAGGTTTCATCA
CAAGAGATGAAGGAGGTAACTGGATGCCCACTCTCTTTTGGGAAAGGTCA
TGACTGATTGTCTGAATATCTGAATGTCTTTAATTACCACATGAGAAATT
TTAACTCTTGGATAAGATTGTAAGATCTCATTTTGGGGTTTGCCTGGAGA
TCTTTCAACTGCTGCTTTTGGCTATGTAAATGATGTTGGTAAATGTGTAA
AAAAAGGGTACTTTGGTGTTTCTTAAGCTTTAGTGAGGATGCTATCTTCC
GCCATATCATCTGGCGTTAGCTTTCCTTTTGTTAGATTATGCCAACACAA
TTAGATACACAAAATCCAAGTTTCTTGTACTACATTTGGCAGGATTATTT
CCGGATAAGTGTCCCTGTCAATCAGGTATAAATTTAAGAAACATGCAAAG
ACAGTAATCTTATCTGCCNNNNN
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