EY756092

Overview
NameEY756092
Unique NameEY756092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756092_ssr38 microsatellite EY756092_ssr38:38..57. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_CTEID (60S ribosomal protein L15 OS=Ctenopharyngodon idella GN=rpl15 PE=2 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.638e-58
Identity = 112/185 (60.54%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  S+ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VLNSYW+ EDSTYK+FEVIL D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 1.638e-58
Identity = 112/185 (60.54%), Postives = 131/185 (70.81%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ   + R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +S A+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H AV  DP   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 2.794e-58
Identity = 113/185 (61.08%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYVVYRVR+ R GRKRPVP+G  YGKP +H V Q+KF RS +S A+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H AV  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 3.650e-58
Identity = 112/185 (60.54%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQSNVM FL RVRCW+YRQ  S+ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VLNSYW+ EDSTYK+FEVIL D  H A+  +P   W+  AV KHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_MOUSE (60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_MACFA (60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_HUMAN (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_CYPCA (60S ribosomal protein L15 OS=Cyprinus carpio GN=rpl15 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VL+SYW+ EDSTYK+FEV+L D  H A+  DP   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLIDTFHKAIRRDPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
The following BLAST results are available for this feature:
BLAST of EY756092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_CTEID1.638e-5860.5460S ribosomal protein L15 OS=Ctenopharyngodon idel... [more]
RL15_ANGJA1.638e-5860.5460S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_SINKN2.794e-5861.0860S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]
RL15_HYPMO3.650e-5860.5460S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_RAT4.766e-5859.4660S ribosomal protein L15 OS=Rattus norvegicus GN=... [more]
RL15_PONAB4.766e-5859.4660S ribosomal protein L15 OS=Pongo abelii GN=RPL15... [more]
RL15_MOUSE4.766e-5859.4660S ribosomal protein L15 OS=Mus musculus GN=Rpl15... [more]
RL15_MACFA4.766e-5859.4660S ribosomal protein L15 OS=Macaca fascicularis G... [more]
RL15_HUMAN4.766e-5859.4660S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
RL15_CYPCA4.766e-5859.4660S ribosomal protein L15 OS=Cyprinus carpio GN=rp... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756092 ID=EY756092; Name=EY756092; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGATAACCCTAGTCGCACGGATACTGCGCAGCTCAGCTCAG
CTCAGCTCAGAGGCAGTGGGGGCTTACACGTTCGTGTCGGAGCTATGGAG
GAAGAAACAGTCAAATGTGATGATGTTCTTGCAGAGGGTGAGGTGTTGGG
AGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTCCCACTCCACCT
GACTAGGCTCGACGCTTGTGTTACTATGCCAAGCTGGGTTATGTTGTTTA
TCGTGTGCGGCTATGGCGTGTTGGTCGGAAGAGGCCTGTTCCCAGGGGCA
TTGTGTATGGTAAACCCACAAACCATTGTGTTACTCAACTGAAGTTTCAA
CGCAGCAAGAGGTCTGTTGCACAGGAGCGTGCCGGTCGCAAGTTGGGAGG
TCCTACGGTTCTCAACTCTTACTGGATCAATGAGGACTCCACTTATAAGT
ACTTTGAGGTGATCTTGCCTGATCCTGCTCATAATGCCGTCCTACATGAC
CCCAGAATTAATTGGTTATGCTATGCTGTCCATAAGCACAGGGGACTCCG
TGGTCTTTACTCTGCATGTAAGAATTACAGAGGCCTACCTGCGATATGAC
ACTTGCACTCTAGGCTCGGACTTCACAAGGTCTAACTGTAATAGAACAAT
ACTTCTTTCCCTCAGGCGATACCGCCGATCACTGCTTTGGGTTGATGATT
TATCCTCNGNAGAGGGATTTGCCTGGATGACATAAAAATTTCACTCTGAC
ACTTTGGGGATTTTATTCAGGGGAGGTGTCGGATCCCCAAACTGTATTTT
TATAAAAACTTCGAGGTTCTCGGGCTCCCGGAATATCCAGCCTTAGTTCC
CAAACTGGTAAGGGCTGTGAGGATTTTTTCCTCCCGGGGGCACTTTCCCT
T
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