EY756092

Overview
NameEY756092
Unique NameEY756092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756092_ssr38 microsatellite EY756092_ssr38:38..57. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_BOVIN (60S ribosomal protein L15 OS=Bos taurus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 4.766e-58
Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V QLKF RS +SVA+ERAGR  G   VLNSYW+ EDSTYK+FEVIL DP H A+  +P   W+   VHKHR +RGL SA +  RGL      H  +G
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_SILAS (60S ribosomal protein L15 OS=Silurus asotus GN=rpl15 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 1.062e-57
Identity = 111/185 (60.00%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  R T PD ARRL Y AK GYV+YRVR+ R GRKRPVP+G  YGKP +H V QLKF RS +S+A+ERAGR  GG  VLNSYW+ EDSTYK+FEVIL D  H A+  +P + W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRATRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 1.387e-57
Identity = 111/185 (60.00%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GA  ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YRVR+ R GRKRPVP+G  YGKP +H V QLKF RS +S+A+ERAGR  GG  VLNSYW+ EDSTYK+FEVIL D  H A+  +P + W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGASKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.387e-57
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VL+SYW+ EDSTYK+FEV+L D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 1.387e-57
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VL+SYW+ EDSTYK+FEV+L D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 111/185 (60.00%), Postives = 131/185 (70.81%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYVVYRVR+ R GRKRPVP+G  YGKP +H V Q+KF RS +S A+ERAGR  G   VLNSYW+ EDSTYK+FEVIL D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 4.035e-57
Identity = 110/185 (59.46%), Postives = 133/185 (71.89%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ +LWRKKQS+VM FL RVRCW+YRQ  ++ R  RPT PD ARRL Y AK GYV+YRVR+ R GRKRPVP+G  YGKP +H V Q+KF RS +SVA+ERAGR  GG  VL+SYW+ EDSTYK+FEVIL D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 5.270e-57
Identity = 109/185 (58.92%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLG 620
            +GAY ++ ELWRKKQS+VM FL RVRCW+YRQ  S+ R  +PT PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +H V Q+KF RS +S A+ERAGR  GG  VL+SYW+ EDSTYK+FEVIL D  H A+  +P   W+  AVHKHR +RGL SA K  RGL      H  +G
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIG 185          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 3.416e-56
Identity = 104/174 (59.77%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY +V EL+RKKQS+VM +L R+R W+YRQ     R  RP+ PD ARRL Y AK G+ ++R+R+ R GRKRPVP+G  YGKP +H V QLK  R  +SVA+ER GR+LGG  VLNSYW+ +D+ +KYFEVI+ DPAHNA+  DP +NW+C AVHKHR LRGL SA K+ RGL
Sbjct:    1 MGAYRYVQELYRKKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.461e-56
Identity = 106/174 (60.92%), Postives = 126/174 (72.41%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL RKKQS+V+ FLQRVR WEYRQ   I R  RPT PD ARRL Y AK G+V+YRVR+ R  RKRPVP+G  YGKPTN  V +LK+QRS R+ A+ER GR+     VLNSYW+N+DSTYKYFEVIL DP H A+  D R NW+C  VHKHR  RGL +  K  RG+
Sbjct:    1 MGAYKYLEELERKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICNPVHKHREARGLTATGKKSRGI 174          
The following BLAST results are available for this feature:
BLAST of EY756092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_BOVIN4.766e-5859.4660S ribosomal protein L15 OS=Bos taurus GN=RPL15 P... [more]
RL15_SILAS1.062e-5760.0060S ribosomal protein L15 OS=Silurus asotus GN=rpl... [more]
RL15_SILME1.387e-5760.0060S ribosomal protein L15 OS=Silurus meridionalis ... [more]
RL15_HYDAT1.387e-5758.9260S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_CARAU1.387e-5758.9260S ribosomal protein L15 OS=Carassius auratus GN=... [more]
RL15_EPICO2.366e-5760.0060S ribosomal protein L15 OS=Epinephelus coioides ... [more]
RL15_PELFU4.035e-5759.4660S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_PARDA5.270e-5758.9260S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_ANOGA3.416e-5659.7760S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15B_YEAST4.461e-5660.9260S ribosomal protein L15-B OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756092 ID=EY756092; Name=EY756092; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGATAACCCTAGTCGCACGGATACTGCGCAGCTCAGCTCAG
CTCAGCTCAGAGGCAGTGGGGGCTTACACGTTCGTGTCGGAGCTATGGAG
GAAGAAACAGTCAAATGTGATGATGTTCTTGCAGAGGGTGAGGTGTTGGG
AGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTCCCACTCCACCT
GACTAGGCTCGACGCTTGTGTTACTATGCCAAGCTGGGTTATGTTGTTTA
TCGTGTGCGGCTATGGCGTGTTGGTCGGAAGAGGCCTGTTCCCAGGGGCA
TTGTGTATGGTAAACCCACAAACCATTGTGTTACTCAACTGAAGTTTCAA
CGCAGCAAGAGGTCTGTTGCACAGGAGCGTGCCGGTCGCAAGTTGGGAGG
TCCTACGGTTCTCAACTCTTACTGGATCAATGAGGACTCCACTTATAAGT
ACTTTGAGGTGATCTTGCCTGATCCTGCTCATAATGCCGTCCTACATGAC
CCCAGAATTAATTGGTTATGCTATGCTGTCCATAAGCACAGGGGACTCCG
TGGTCTTTACTCTGCATGTAAGAATTACAGAGGCCTACCTGCGATATGAC
ACTTGCACTCTAGGCTCGGACTTCACAAGGTCTAACTGTAATAGAACAAT
ACTTCTTTCCCTCAGGCGATACCGCCGATCACTGCTTTGGGTTGATGATT
TATCCTCNGNAGAGGGATTTGCCTGGATGACATAAAAATTTCACTCTGAC
ACTTTGGGGATTTTATTCAGGGGAGGTGTCGGATCCCCAAACTGTATTTT
TATAAAAACTTCGAGGTTCTCGGGCTCCCGGAATATCCAGCCTTAGTTCC
CAAACTGGTAAGGGCTGTGAGGATTTTTTCCTCCCGGGGGCACTTTCCCT
T
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