EY756092

Overview
NameEY756092
Unique NameEY756092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756092_ssr38 microsatellite EY756092_ssr38:38..57. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15A_YEAST (60S ribosomal protein L15-A OS=Saccharomyces cerevisiae GN=RPL15A PE=1 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 4.461e-56
Identity = 106/174 (60.92%), Postives = 126/174 (72.41%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL RKKQS+V+ FLQRVR WEYRQ   I R  RPT PD ARRL Y AK G+V+YRVR+ R  RKRPVP+G  YGKPTN  V +LK+QRS R+ A+ER GR+     VLNSYW+N+DSTYKYFEVIL DP H A+  D R NW+C  VHKHR  RGL +  K  RG+
Sbjct:    1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGLTATGKKSRGI 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 102/174 (58.62%), Postives = 133/174 (76.44%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY +V EL+RKKQS+V+ +L RVRCW+YRQ   + R  RP+ PD ARRL Y AK G+++YR+R+ R GRKRPV +G  YGKP +H V QLK  R+ +SVA+ER GR++GG  VLNSYW+ +D+ +KY+EVI  DP HNAV  DP++NW+C AVHKHR LRGL SA K+ RG+
Sbjct:    1 MGAYRYVQELYRKKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_ASPNG (60S ribosomal protein L15 OS=Aspergillus niger GN=rpl15 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 105/174 (60.34%), Postives = 128/174 (73.56%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GA  +V E+ +KKQS+V+ FL RVRCWE RQ  +I R +RP+ PD ARRL Y AK GYVVYR+R+ R GRKRP P+G  YGKPTN  + QLK+QR+ R+ A+ER GR+     VLNSYWIN+DSTYKYFEVIL DP H A+  D RINW+C AVHKHR  RGL +  K  RG+
Sbjct:    1 MGALKYVEEIQKKKQSDVIRFLLRVRCWELRQLNAIHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPAPKGATYGKPTNMGINQLKYQRALRATAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDARINWICNAVHKHREARGLTATGKKSRGI 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 104/174 (59.77%), Postives = 132/174 (75.86%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL+RKKQS+VM +L R+R W+YRQ   + R  RPT PD ARRL Y AK G+V+YR+R+ R GRKRPVP+G  YGKP +H V QLK  R  +S+A+ER GR+LGG  VLNSYWI +D++YKYFEVIL D  H+A+  DP+INW+C  VHKHR LRGL SA K+ RG+
Sbjct:    1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_NEUCR (60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.892e-55
Identity = 107/174 (61.49%), Postives = 126/174 (72.41%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GA  ++ EL +KKQS+V+ FL RVRCWE RQ   I R +RP+ PD ARRL Y AK GYV+YR R+ R GRK+PVP+G  YGKPTN  V QLK+QRS +S A+ER GR+     VLNSYWIN+DSTYKYFEVIL DP H A+  DPRINW+   VHKHR  RGL S  K  RGL
Sbjct:    1 MGALKYLEELQKKKQSDVVRFLLRVRCWELRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRARVRRGGRKKPVPKGATYGKPTNQGVNQLKYQRSLKSTAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDPRINWIVNPVHKHRESRGLTSTGKRSRGL 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.072e-53
Identity = 102/174 (58.62%), Postives = 125/174 (71.84%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL +KKQS+V +FL RVR WEYRQ   I R +RP+ PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +  V  LK+QRS R  A+ER GR      VLNSYW+N+D+TYK+FEVIL DP+H A+  DPRINW+   VHKHR  RGL S  K  RG+
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.072e-53
Identity = 102/174 (58.62%), Postives = 125/174 (71.84%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL +KKQS+V +FL RVR WEYRQ   I R +RP+ PD ARRL Y AK GYV+YR+R+ R GRKRPVP+G  YGKP +  V  LK+QRS R  A+ER GR      VLNSYW+N+D+TYK+FEVIL DP+H A+  DPRINW+   VHKHR  RGL S  K  RG+
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 3.309e-51
Identity = 96/174 (55.17%), Postives = 125/174 (71.84%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ E++RKKQS+VM FL R+R W+YR    + R  RPT P+ ARRL Y AK G+V+YR+R+ R GRKRPVP+G  YGKP +H V QLK  R+ +S+A+ER GR+LGG  VLNSYW+ +DSTYKYFEVIL D  HN +     +NW+C    KHR +RG  SA + +RGL
Sbjct:    1 MGAYKYMQEIYRKKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGL 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.321e-51
Identity = 101/174 (58.05%), Postives = 123/174 (70.69%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ EL++KKQS+ + FL RVRCWEYR  P   R + PT  D ARRL Y A  G+VVYR+R+ R GRKR VP G   GKP  H V +LK  R+ RSVA+ER GR+     VLNSYW+N+DSTYKY+EVIL D +HNA+ +DPR NW+C  VHKHR LRGL SA    RGL
Sbjct:    1 MGAYKYLQELYKKKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGL 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.240e-50
Identity = 96/174 (55.17%), Postives = 124/174 (71.26%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            +GAY ++ E+WRKKQS+ + +L R+R W YRQ  ++ RV RPT P+ ARRL Y AK G+VVYRVR+ R  RKRPV +G  YGKP  H V +LK  +SK++VA+ RAGR+LG   VLNSYW+ EDSTYK++EV+L DP H A+  +P   W+   VHKHR  RGL SA +  RGL
Sbjct:    1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGL 174          
The following BLAST results are available for this feature:
BLAST of EY756092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15A_YEAST4.461e-5660.9260S ribosomal protein L15-A OS=Saccharomyces cerev... [more]
RL15_CHITE9.939e-5658.6260S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_ASPNG9.939e-5660.3460S ribosomal protein L15 OS=Aspergillus niger GN=... [more]
RL15_DROME1.298e-5559.7760S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_NEUCR2.892e-5561.4960S ribosomal protein L15 OS=Neurospora crassa GN=... [more]
RL15B_SCHPO2.072e-5358.6260S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO2.072e-5358.6260S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_ORCLI3.309e-5155.1760S ribosomal protein L15 OS=Orconectes limosus GN... [more]
RL15_DICDI4.321e-5158.0560S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_CAEEL6.240e-5055.1760S ribosomal protein L15 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756092 ID=EY756092; Name=EY756092; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGATAACCCTAGTCGCACGGATACTGCGCAGCTCAGCTCAG
CTCAGCTCAGAGGCAGTGGGGGCTTACACGTTCGTGTCGGAGCTATGGAG
GAAGAAACAGTCAAATGTGATGATGTTCTTGCAGAGGGTGAGGTGTTGGG
AGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTCCCACTCCACCT
GACTAGGCTCGACGCTTGTGTTACTATGCCAAGCTGGGTTATGTTGTTTA
TCGTGTGCGGCTATGGCGTGTTGGTCGGAAGAGGCCTGTTCCCAGGGGCA
TTGTGTATGGTAAACCCACAAACCATTGTGTTACTCAACTGAAGTTTCAA
CGCAGCAAGAGGTCTGTTGCACAGGAGCGTGCCGGTCGCAAGTTGGGAGG
TCCTACGGTTCTCAACTCTTACTGGATCAATGAGGACTCCACTTATAAGT
ACTTTGAGGTGATCTTGCCTGATCCTGCTCATAATGCCGTCCTACATGAC
CCCAGAATTAATTGGTTATGCTATGCTGTCCATAAGCACAGGGGACTCCG
TGGTCTTTACTCTGCATGTAAGAATTACAGAGGCCTACCTGCGATATGAC
ACTTGCACTCTAGGCTCGGACTTCACAAGGTCTAACTGTAATAGAACAAT
ACTTCTTTCCCTCAGGCGATACCGCCGATCACTGCTTTGGGTTGATGATT
TATCCTCNGNAGAGGGATTTGCCTGGATGACATAAAAATTTCACTCTGAC
ACTTTGGGGATTTTATTCAGGGGAGGTGTCGGATCCCCAAACTGTATTTT
TATAAAAACTTCGAGGTTCTCGGGCTCCCGGAATATCCAGCCTTAGTTCC
CAAACTGGTAAGGGCTGTGAGGATTTTTTCCTCCCGGGGGCACTTTCCCT
T
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