EY756092

Overview
NameEY756092
Unique NameEY756092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756092_ssr38 microsatellite EY756092_ssr38:38..57. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.640e-24
Identity = 65/175 (37.14%), Postives = 96/175 (54.86%), Query Frame = 3
Query:   63 AVGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            A+  Y ++   W  ++    +  QR+  W  R+ PSIVR+ +PT  + AR L Y AK G+V+ RVR+ R G  +P P      +P    V      +  R +A+ERA RK     VL SY++ ED  YKY+E+++ DP+H  +  DP+  WL    +++R  RGL SA K  RGL
Sbjct:    2 ALSMYHYIENTWNSEEWKKSVLRQRLIKW--RKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGL 172          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.448e-24
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 3
Query:   66 VGAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGLPAI*HLHSRLGLHK 629
            + +Y+ + + W+K + + +  +Q+ R   +R+  S+VR+  PT  D AR L Y AK G+++ R R+ + G+ RP   G    +P      +L  ++S + +A+ERA  K     VLNSY++ ED  YKY+EVIL D +  AVL D  ++W+  + +K R  RGL SA    RGL      H RLG  K
Sbjct:    2 LSSYSMIRDSWKKLKKSDIYPVQKARMVSWRKSGSVVRLDYPTRLDRARSLGYKAKQGFIIVRSRVRKGGQHRPKIMG--GRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGLG-----HGRLGSAK 182          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.681e-24
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   75 YTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            Y  V E W+K   + +  LQ  R  ++R+ P++VRV +PT  D AR L Y AK G +V RV + R G ++P P+     KP    + ++   +S + +A+ERA ++     VLNSY + ED   K++EVIL D  H ++ +D     LC   H +R  RGL SA K  RGL
Sbjct:    4 YKHVKEAWKKPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGL 172          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.681e-24
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 3
Query:   75 YTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            Y ++ E W++     +  L   R  ++R+ P++VR+ RPT  D AR L Y AK G +V RVR+ R GR+   P      K     V +   +++ + +A+ERA RK     VLNSYW+ ED  YK+FEVIL D  H A+  DP+++W+     + R  RGL SA +  RGL
Sbjct:    5 YAYIREAWKRPYEGYVGELMWHRLQKWRREPAVVRIPRPTRLDRARALGYKAKKGIIVVRVRIRRGGRRATRPNK--GRKSKGLMVNRRTPKKNLQWIAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGL 171          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_HALWD (50S ribosomal protein L15e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.310e-23
Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 3
Query:   75 YTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVG-RKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            Y+ + E W++     +  LQ  R  E+R   +IVR+ RPT  D AR L Y AK G ++ RV + + G RK+    G    +     V +L  + S + +A+ERA RK      L SYW+ ED + K+ E+IL DP H A+ +D  +NW+C   HK R  RGL +A ++ RGL
Sbjct:    6 YSHIKEAWKQPGDGKLAELQWQRKQEWRDQGAIVRIDRPTRLDKARELGYKAKQGVIIARVAVRKGGARKKRFTSG---RRSKRQGVNRLGRRTSIQRIAEERAARKYPNLRTLASYWVGEDGSQKWHEIILIDPEHAAIENDDDLNWICDDTHKGRAFRGLTNAGRSNRGL 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_THEAC (50S ribosomal protein L15e OS=Thermoplasma acidophilum GN=rpl15e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.919e-23
Identity = 67/173 (38.73%), Postives = 94/173 (54.34%), Query Frame = 3
Query:   69 GAYTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            G Y  V E W+  + + +  L + R  E+R  PSIVR+  PT  D AR L + +K G++V R R+ R G  R    G    +P      +L  ++S + +A+ERA  K     VLNSY++ ED  YKYFEVIL D +H  + +DP I+W+    +  R  RGL SA    RGL
Sbjct:    5 GLYQAVREEWKSLKKSEIYDLVKKRMIEWRHGPSIVRLEHPTRIDRARALGFKSKDGFIVVRSRVRRGGSNREKIMG--GRRPRRMAYNKLTRKKSLKLIAEERAADKYPNMEVLNSYYVGEDGLYKYFEVILVDRSHPNIFNDPHISWISEPQNTGRVYRGLTSAGYKVRGL 175          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_METHJ (50S ribosomal protein L15e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.919e-23
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 3
Query:   75 YTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHC-VTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            Y +V + W+      +  L   R  ++R+  SIVRV RPT  D AR L Y AK G VV RV++ R GR+       V G+ T    V +    +S + +A+ERA RK     VLNSYW+ ED   K++EVIL DP H ++++D  +NW+    H+ R  RGL SA    RG+
Sbjct:    6 YAYVRDAWKIPDDTGVKALLWERMQDWRREGSIVRVRRPTRIDRARALGYKAKQGIVVVRVKVRRGGRRAS---RYVRGRRTARMGVNRKTMGKSIQRIAEERACRKYPNMEVLNSYWVGEDGRQKWYEVILLDPHHPSIINDKTLNWISKPGHRGRSERGLTSAGVKGRGM 174          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 3
Query:   75 YTFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            Y ++ + W   QS+    + R R  E+R+ P++ R+ +PT  + AR + Y AK G+VV RVR+ R G  +P P      +P    V      +  R +A+E+A RK     VL SY++ ED  YKY+E+I+ DP H  +  DP + WL    ++ R  RGL SA K  RGL
Sbjct:    6 YNYIEQTW---QSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGL 171          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_SULIY (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 3
Query:   78 TFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            T+ SE W+K        + R R  E+R+ PSIVR+ +PT  + AR L Y AK G+V+ RVR+ R G  +P P      +P    V      +  + +A+ERA RK     VL SY++ ED  YKY+E+I+ DP+H  + +DP   WL    +++R  RGL SA K  RGL
Sbjct:   12 TWNSEEWKKG-------VLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGL 172          
BLAST of EY756092 vs. ExPASy Swiss-Prot
Match: RL15E_SULIN (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl15e PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 3
Query:   78 TFVSELWRKKQSNVMMFLQRVRCWEYRQHPSIVRVTRPTPPD*ARRLCYYAKLGYVVYRVRLWRVGRKRPVPRGIVYGKPTNHCVTQLKFQRSKRSVAQERAGRKLGGPTVLNSYWINEDSTYKYFEVILPDPAHNAVLHDPRINWLCYAVHKHRGLRGLYSACKNYRGL 587
            T+ SE W+K        + R R  E+R+ PSIVR+ +PT  + AR L Y AK G+V+ RVR+ R G  +P P      +P    V      +  + +A+ERA RK     VL SY++ ED  YKY+E+I+ DP+H  + +DP   WL    +++R  RGL SA K  RGL
Sbjct:   12 TWNSEEWKKG-------VLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGL 172          
The following BLAST results are available for this feature:
BLAST of EY756092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15E_SULSO2.640e-2437.1450S ribosomal protein L15e OS=Sulfolobus solfatari... [more]
RL15E_PICTO3.448e-2436.1750S ribosomal protein L15e OS=Picrophilus torridus... [more]
RL15E_META37.681e-2438.0150S ribosomal protein L15e OS=Methanococcus aeolic... [more]
RL15E_ARCFU7.681e-2438.6050S ribosomal protein L15e OS=Archaeoglobus fulgid... [more]
RL15E_HALWD1.310e-2337.7950S ribosomal protein L15e OS=Haloquadratum walsby... [more]
RL15E_THEAC2.919e-2338.7350S ribosomal protein L15e OS=Thermoplasma acidoph... [more]
RL15E_METHJ2.919e-2339.5350S ribosomal protein L15e OS=Methanospirillum hun... [more]
RL15E_SULTO4.978e-2336.8450S ribosomal protein L15e OS=Sulfolobus tokodaii ... [more]
RL15E_SULIY4.978e-2339.4150S ribosomal protein L15e OS=Sulfolobus islandicu... [more]
RL15E_SULIN4.978e-2339.4150S ribosomal protein L15e OS=Sulfolobus islandicu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756092 ID=EY756092; Name=EY756092; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGATAACCCTAGTCGCACGGATACTGCGCAGCTCAGCTCAG
CTCAGCTCAGAGGCAGTGGGGGCTTACACGTTCGTGTCGGAGCTATGGAG
GAAGAAACAGTCAAATGTGATGATGTTCTTGCAGAGGGTGAGGTGTTGGG
AGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTCCCACTCCACCT
GACTAGGCTCGACGCTTGTGTTACTATGCCAAGCTGGGTTATGTTGTTTA
TCGTGTGCGGCTATGGCGTGTTGGTCGGAAGAGGCCTGTTCCCAGGGGCA
TTGTGTATGGTAAACCCACAAACCATTGTGTTACTCAACTGAAGTTTCAA
CGCAGCAAGAGGTCTGTTGCACAGGAGCGTGCCGGTCGCAAGTTGGGAGG
TCCTACGGTTCTCAACTCTTACTGGATCAATGAGGACTCCACTTATAAGT
ACTTTGAGGTGATCTTGCCTGATCCTGCTCATAATGCCGTCCTACATGAC
CCCAGAATTAATTGGTTATGCTATGCTGTCCATAAGCACAGGGGACTCCG
TGGTCTTTACTCTGCATGTAAGAATTACAGAGGCCTACCTGCGATATGAC
ACTTGCACTCTAGGCTCGGACTTCACAAGGTCTAACTGTAATAGAACAAT
ACTTCTTTCCCTCAGGCGATACCGCCGATCACTGCTTTGGGTTGATGATT
TATCCTCNGNAGAGGGATTTGCCTGGATGACATAAAAATTTCACTCTGAC
ACTTTGGGGATTTTATTCAGGGGAGGTGTCGGATCCCCAAACTGTATTTT
TATAAAAACTTCGAGGTTCTCGGGCTCCCGGAATATCCAGCCTTAGTTCC
CAAACTGGTAAGGGCTGTGAGGATTTTTTCCTCCCGGGGGCACTTTCCCT
T
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