EY755999

Overview
NameEY755999
Unique NameEY755999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755999 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.277e-48
Identity = 98/235 (41.70%), Postives = 135/235 (57.45%), Query Frame = 2
Query:   14 PTKDLHVI-GHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSY----GNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPI-TVSDPIMMHDFAITENYAIFMDLPLYFR 700
            P  D  +I G LP  LNG ++R GPNP+F P   YH FDGDGM+H ++I +GKAT  SR+V+T +   E+  G      +    G  G+     +      +VL   Y    G G ANT+L +   +L AL E+D PYAV++ E GD++T+G  D+D +L  S TAHPK DP TGE F F Y   PP++TY      G     VPI +++ P  +HDFAIT+ +AIF ++ L  R
Sbjct:  123 PPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTGAPVMPNV--FSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMR 355          

HSP 2 Score: 35.8094 bits (81), Expect = 1.277e-48
Identity = 15/41 (36.59%), Postives = 26/41 (63.41%), Query Frame = 1
Query:  742 DDTKKARXGILPRYAKNEAXNEWXELPN-AYLHKGHAWGEE 861
            D+ K  R G++P+YA +E+  +W E+P    +H  +AW E+
Sbjct:  372 DNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDED 412          
BLAST of EY755999 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.663e-47
Identity = 98/234 (41.88%), Postives = 143/234 (61.11%), Query Frame = 2
Query:   26 LHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIK-DGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVK 718
            L V+G +P CL G ++R G NP F P+AG+H FDGDGMIH + I  D + +Y  R+ +T+RL QE   G + F K IG+L G  GL  + +   RA + ++D + G G AN  +V+ +G+LLA+SE D PY VK+   GDL+T+G   +D ++  S  AHPKVD  TG++ T  Y     P++ Y   +  G     V IT+ +P M+HDFAITEN+ +  D  + F+  EM++
Sbjct:  117 LEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIR 350          
BLAST of EY755999 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.885e-28
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 2
Query:  320 LDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVL-EDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDP-VPI-TVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVK 718
            +D + G G ANT+L + +G+L AL E D PY V++  EDGD+ T+G ++ +   + S TAHPK DP TGE F+F Y    PY+TY     DG    P VPI +  +P  +HDFAITE+YA+F D+ +  +P E+V+
Sbjct:    3 VDPTKGIGLANTSLQFSNGRLHALCEYDLPYVVRLSPEDGDISTVGRIENNVSTK-STTAHPKTDPVTGETFSFSYGPIQPYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEHYAVFPDIQIVMKPAEIVR 137          

HSP 2 Score: 33.4982 bits (75), Expect = 7.885e-28
Identity = 16/41 (39.02%), Postives = 24/41 (58.54%), Query Frame = 1
Query:  742 DDTKKARXGILPRYAKNEAXNEWXELPN-AYLHKGHAWGEE 861
            D  K  R G+LPRYA +++   W ++P    +H  +AW EE
Sbjct:  145 DLEKVPRLGLLPRYATSDSEMRWFDVPGFNMVHVVNAWEEE 185          
BLAST of EY755999 vs. ExPASy Swiss-Prot
Match: ACOX_SYNY3 (Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC 6803) GN=sll1541 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.016e-11
Identity = 70/235 (29.79%), Postives = 103/235 (43.83%), Query Frame = 2
Query:   32 VIGHLPDCLNGEFVRVGPNP-KFAPVAGYHWFDGDGMIHGLRIK-DGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHS--FTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDP---------------IMMHDFAITENYAIFM 679
            V G +P  L G   R GP   +       H FDGDGM+   +   DG+  + S+FVRT    +E+  G   +      +G+FG      Q     LK +        ANT + Y   +LLAL E  +P+    LE  +L T+G+ D    L      +AHP++DP +    TF     P Y+T+ + S    +   + +   DP                 +HDFAIT +YAIF+
Sbjct:   38 VEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGYVEEQKAGKMIY------RGVFG-----SQPAGGWLKTIFDLRLKNIANTNITYWGDRLLALWEGGQPHR---LEPSNLATIGLDDLGGILAEGQPLSAHPRIDPAS----TFDGGQ-PCYVTFSIKSS---LSSTLTLLELDPQGKLLRQKTETFPGFAFIHDFAITPHYAIFL 250          
BLAST of EY755999 vs. ExPASy Swiss-Prot
Match: BCDO2_MACFA (Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.865e-11
Identity = 62/241 (25.73%), Postives = 93/241 (38.59%), Query Frame = 2
Query:   32 VIGHLPDCLNGEFVRVGPNP-KFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDL------KGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQ-HSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHD-------------PVPITVSDPIMMHDFAITENYAIFMDLPL 691
            V GH P  LNG  +R+GP   +F      HWFDG  ++H  R+  G  TY S+F+++   K           + G L      K +F   M   ++      + D        N   V + G     +E +    V +     L+    +D+ K +  +  TAHP  DP  G  +  G +  P   +Y+VI       D               P     P   H F +T NY IF++ PL
Sbjct:   49 VWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTD------NTNVNYVRYKGDYYLCTETNFMNKVDI---ETLEKTEKVDWSKFIAVNGATAHPHYDP-DGTAYNMGNSFGPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPL 279          
The following BLAST results are available for this feature:
BLAST of EY755999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CCD4_ARATH1.277e-4841.70Probable carotenoid cleavage dioxygenase 4, chloro... [more]
NCED6_ARATH8.663e-4741.889-cis-epoxycarotenoid dioxygenase NCED6, chloropla... [more]
ZCD_CROSA7.885e-2844.85Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromo... [more]
ACOX_SYNY32.016e-1129.79Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp... [more]
BCDO2_MACFA5.865e-1125.73Beta,beta-carotene 9',10'-oxygenase OS=Macaca fasc... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-D11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755999 ID=EY755999; Name=EY755999; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCTCCTACTAAAGACCTCCACGTCATCGGCCATCTCCCCG
ATTGCTTGAATGGGGAGTTTGTCAGGGTTGGTCCTAATCCCAAGTTTGCC
CCTGTGGCCGGATACCACTGGTTTGATGGAGATGGCATGATTCATGGTCT
GCGCATCAAAGACGGAAAGGCTACATATGTCTCCCGTTTTGTGAGGACTT
CACGTCTTAAACAGGAAGAATTTTTCGGAGGTGCTAAATTTATGAAGATT
GGAGACCTTAAGGGGCTATTTGGATTACTCATGGTTAACATGCAAATGCT
TAGAGCAAAGTTGAAAGTACTGGATGTTTCATATGGAAATGGGACAGCTA
ATACAGCTCTTGTATATCACCATGGGAAACTTCTAGCGCTCTCAGAGGCG
GACAAACCATATGCCGTCAAAGTTCTGGAAGATGGAGATCTGCAAACACT
TGGTATGCTTGACTATGACAAGAGATTACAACATTCCTTTACTGCCCATC
CAAAGGTTGATCCATACACTGGCGAGATGTTTACCTTTGGCTATGCACAC
ACACCACCATATATCACATACAGAGTTATTTCAAAGGATGGTTTCATGCA
TGATCCTGTACCAATAACCGTATCAGACCCCATCATGATGCACGACTTTG
CTATTACTGAGAATTATGCTATTTTCATGGATCTTCCGCTGTATTTCAGA
CCAAAGGAAATGGTGAAAGAAACAAGCTGATATTCACATTTGATGATACA
AAGAAAGCTCGNNTTGGTATACTTCCCCGATATGCAAAGAATGAGGCTCN
NAATGAATGGNTTGAGCTTCCTAATGCTTATCTTCATAAAGGCCATGCTT
GGGGAGAGGAGATGAAGTGGTCTGATCACTTGCGGCTAGACAGCCGATCT
GACCATGGCATGGG
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