EY755995

Overview
NameEY755995
Unique NameEY755995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6061 contig Csv1_Contig6061:83..653. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755995 vs. ExPASy Swiss-Prot
Match: YKAB_BACPF (Uncharacterized aminotransferase in katA 3'region OS=Bacillus pseudofirmus PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11
Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 1
Query:   73 TFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREXXXXXXXXXXXXXXFRIKPPMCFTKDDADFLVDALDYSMSK 453
            TFGGNP+  +  LA L V+ +E    +  +VG++   RL  L+E++++IG +R  GLM+G+E++  + +K    A   +L   L+E               R+ PP+  TK+  D  +D L  ++ K
Sbjct:  309 TFGGNPIACSAALATLDVLKEENLLDNAREVGAYARERLNLLKEKYEMIGSIRSVGLMIGIEIIDPQTKKPDGAAVLRILDLALQE-GVLFYLCGNEGEVIRMIPPLSVTKEQIDDGLDMLQRALVK 434          
BLAST of EY755995 vs. ExPASy Swiss-Prot
Match: DGDA_BURCE (2,2-dialkylglycine decarboxylase OS=Burkholderia cepacia GN=dgdA PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 1
Query:   67 FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE--XXXXXXXXXXXXXXFRIKPPMCFTKDDADFLVDALDYSMSK 453
            + T   +P+ +A GL VL V+ ++   A    +G  L   L  L ER D IGDVRGRGL++G+E+V DR+ K PA    A +  +                   FRI PP+  ++D+ D  +  L  ++ +
Sbjct:  301 YTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431          
The following BLAST results are available for this feature:
BLAST of EY755995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
YKAB_BACPF2.559e-1130.71Uncharacterized aminotransferase in katA 3'region ... [more]
DGDA_BURCE9.726e-1132.062,2-dialkylglycine decarboxylase OS=Burkholderia c... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-D06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755995 ID=EY755995; Name=EY755995; organism=Citrus sinensis; type=EST; length=571bp
CCACGCGTCCGAGGAGCTGTAGCCACCACACCAGAAATAGCAAATGTAAT
GGCTCAAAAGATTCAGTTTAACACTTTTGGCGGAAACCCGGTGTGTTCTG
CTGGTGGACTTGCTGTGCTCAGGGTCATTGATAAAGAAAGGCGGCAAGCA
CACTGTGCTGATGTTGGTTCCCACTTGCTTGGACGCTTGAGAACTTTACA
AGAGAGACATGATATCATTGGAGATGTAAGAGGGAGAGGCCTAATGGTGG
GGATGGAATTGGTAACTGACAGGAAGGAGAAGACACCTGCCAAGGCAGAA
ACTGCAGTCTTGTTTGAGAAGCTTAGAGAACTCGGTGTTCTCGTTGGCAA
AGGAGGACTACATGGAAATGTTTTCAGAATTAAGCCACCAATGTGTTTTA
CAAAAGATGATGCAGATTTTCTAGTTGATGCTTTGGACTATTCCATGTCA
AAGTTGTGAAGATAAATCTGTTACAAGCTGGGGAAAATCATGTAACATTT
CAAATCCTCTGAATATCGGACTCTATAGAGAGCTTAGTTTCAATAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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