EY755990

Overview
NameEY755990
Unique NameEY755990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755990_ssr711 microsatellite EY755990_ssr711:711..725. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 4.871e-58
Identity = 107/129 (82.95%), Postives = 115/129 (89.15%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 401
            Y  +GGGAN +A GYSTG  L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+GAAVIYN+ KAWDD W+FW GPFIGA  AA YHQ+ILRA A+KALG
Sbjct:  146 YNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALG 274          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.776e-56
Identity = 101/129 (78.29%), Postives = 111/129 (86.05%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 401
            Y   GGGAN +A GY+ G    AE+IGTFVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNK + WDD W+FWVGPF+GA  AA YHQ++LRA A+KALG
Sbjct:  146 YNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALG 274          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.859e-55
Identity = 102/124 (82.26%), Postives = 112/124 (90.32%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            PY T+ GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AWDD W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  157 PYQTL-GGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRA 279          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.597e-55
Identity = 101/124 (81.45%), Postives = 112/124 (90.32%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            PY T+ GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD +WDD W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  158 PYQTL-GGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRA 280          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.123e-54
Identity = 99/122 (81.15%), Postives = 110/122 (90.16%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y  +GGGAN +A GY+ G GL AEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AWDD W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  159 YQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRA 280          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.766e-53
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y  +GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AW+D W+FWVGPF+GAA+AA YHQ I+RA
Sbjct:  161 YMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRA 282          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.161e-53
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y  +GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+D AW+D W+FWVGPFIGAA+AA YHQ I+RA
Sbjct:  161 YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRA 282          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.161e-53
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y   GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I+NKD AWDD W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  158 YQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRA 279          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.047e-53
Identity = 96/122 (78.69%), Postives = 109/122 (89.34%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y  +GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+D AW D W+FWVGPFIGAA+AA YHQ I+RA
Sbjct:  164 YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRA 285          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.051e-52
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 3
Query:   15 YTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 380
            Y   GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD +WDD W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  158 YQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRA 279          
The following BLAST results are available for this feature:
BLAST of EY755990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
PIP26_ORYSJ4.871e-5882.95Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA7.776e-5678.29Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP13_ARATH3.859e-5582.26Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP14_ARATH8.597e-5581.45Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_ARATH1.123e-5481.15Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ2.766e-5378.69Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE6.161e-5378.69Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP12_ARATH6.161e-5379.51Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_MAIZE8.047e-5378.69Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_VICFA1.051e-5279.51Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755990 ID=EY755990; Name=EY755990; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTACTACACAATGCACGGAGGTGGGGCCAACGAGCTGGCC
GATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTT
TGTGTTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCA
GAGACTCCCATGTCCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTG
TTCATGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCC
AGCAAGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGG
ATGATCAATGGCTCTTCTGGGTTGGACCCTTCATCGGTGCAGCAATTGCG
GCTTTCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGG
TTCATTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCGACAAGTGGATT
ATCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGG
GAAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGT
GTGATTTGTGCTTTCAAGGAGTTGTAGGCAAAAAGTCTCTTAGACAATGA
GGGGGCTTGCTTTTTTGTAATCCCCTCTGTTGTTTTCAAGCACTTTCCTT
AGAATTCACTTCTTCAATGTTTCTGTCTCTTTCTACTTTGTATTATTTTC
TCCGNATGTGATTATTATTATTATTGTTGTGCTTTTAGGAAAAAAAAAAA
TATTACCTATGTTGTCATTTTAACAANCCAACCACCCACCTACACCTCTC
CATCACAACTATAACCACCTTTTACACACCTTTACCACACACCACTCTTC
TCTTCCCCCCCTTCCCACCCTTTACCTCTCAAGAGGGGGCCCCCTCTAAG
AGACCCCTCTCCC
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