EY755990

Overview
NameEY755990
Unique NameEY755990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755990_ssr711 microsatellite EY755990_ssr711:711..725. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.646e-21
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N+LADG ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  125 GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.646e-21
Identity = 59/114 (51.75%), Postives = 71/114 (62.28%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N LA G  +G GL  EIIGT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  TG GINPARS G+AVI +    + D W+FWVGPFIG A+A   + FIL
Sbjct:  127 GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.646e-21
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N+LADG ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  125 GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 4.762e-21
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N LA G ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  127 GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 6.219e-21
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N LA G ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  127 GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.385e-20
Identity = 58/114 (50.88%), Postives = 71/114 (62.28%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G NELA G ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARS G++VI +  K   D W+FWVGPFIG A+A   + FIL
Sbjct:  127 GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 4.031e-20
Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N+LA G ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG+A+A   + FIL
Sbjct:  125 GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 4.031e-20
Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N+LA G ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG A+A   + FIL
Sbjct:  125 GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17
Identity = 53/114 (46.49%), Postives = 65/114 (57.02%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G N L+ G S G GL  EI+ TF LV  V + TD +R      VP    L IG +V + HL  I  TG G+NPARS G+AV+    K +   W+FWVGP IG A AA  + FIL
Sbjct:  129 GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    + G GL  E+I TF LV+T+F++ D KR+     V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  138 PPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 251          
The following BLAST results are available for this feature:
BLAST of EY755990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQP1_PONAB3.646e-2150.88Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_PIG3.646e-2151.75Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN3.646e-2150.88Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP4.762e-2150.88Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN6.219e-2150.88Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA1.385e-2050.88Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_RAT4.031e-2049.12Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_MOUSE4.031e-2049.12Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQPA_RANES1.098e-1746.49Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_RAT2.070e-1638.84Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755990 ID=EY755990; Name=EY755990; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTACTACACAATGCACGGAGGTGGGGCCAACGAGCTGGCC
GATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTT
TGTGTTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCA
GAGACTCCCATGTCCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTG
TTCATGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCC
AGCAAGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGG
ATGATCAATGGCTCTTCTGGGTTGGACCCTTCATCGGTGCAGCAATTGCG
GCTTTCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGG
TTCATTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCGACAAGTGGATT
ATCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGG
GAAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGT
GTGATTTGTGCTTTCAAGGAGTTGTAGGCAAAAAGTCTCTTAGACAATGA
GGGGGCTTGCTTTTTTGTAATCCCCTCTGTTGTTTTCAAGCACTTTCCTT
AGAATTCACTTCTTCAATGTTTCTGTCTCTTTCTACTTTGTATTATTTTC
TCCGNATGTGATTATTATTATTATTGTTGTGCTTTTAGGAAAAAAAAAAA
TATTACCTATGTTGTCATTTTAACAANCCAACCACCCACCTACACCTCTC
CATCACAACTATAACCACCTTTTACACACCTTTACCACACACCACTCTTC
TCTTCCCCCCCTTCCCACCCTTTACCTCTCAAGAGGGGGCCCCCTCTAAG
AGACCCCTCTCCC
back to top