EY755990

Overview
NameEY755990
Unique NameEY755990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755990_ssr711 microsatellite EY755990_ssr711:711..725. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  141 PPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  138 PPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  138 PPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.867e-16
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    S G GL  E+I TF LV+T+F++ D KR+     +     L IG +V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  138 PPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.027e-15
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 3
Query:   33 GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILR 377
            G +  +   + G  +  E + TF+LV  V   +DP R+     +   APL +G ++   HL  I +TG  +NPARS G AV+ N    W D W++WVGP +GA +AA  ++F+ +
Sbjct:  131 GVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.342e-15
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 3
Query:   45 LADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            +A G S   GL  EII TF LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+ G A++  +   W + W++WVGPFIG A+AA  +++++
Sbjct:  143 VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 3
Query:   45 LADGYSTGVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            LA G     GL  EII TF LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+ G A++  +   W D W++WVGPFIG+A+AA  +++++
Sbjct:  143 LASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            P   + G G   +    + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W + W++WVGP +GA +A   ++++
Sbjct:  138 PPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.904e-15
Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 3
Query:   30 GGANELADGYSTGVG----LAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            GGA   A   S GVG    +  EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA  +  I
Sbjct:  126 GGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.904e-15
Identity = 50/123 (40.65%), Postives = 70/123 (56.91%), Query Frame = 3
Query:    9 PYYTMHGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            PY        N L +  + G  + AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AVI ++  +    W+FWVGP +GAA AA  + ++L
Sbjct:  110 PYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
The following BLAST results are available for this feature:
BLAST of EY755990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQP4_NOTAL2.704e-1638.02Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME3.531e-1638.02Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_HUMAN4.612e-1638.02Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_BOVIN7.867e-1638.02Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_HAEIX1.027e-1535.65Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
TIP32_ARATH1.342e-1542.34Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ARATH1.753e-1542.34Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQP4_MOUSE1.753e-1537.19Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
TIP12_ORYSJ3.904e-1543.70Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP5_SHEEP3.904e-1540.65Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755990 ID=EY755990; Name=EY755990; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTACTACACAATGCACGGAGGTGGGGCCAACGAGCTGGCC
GATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTT
TGTGTTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCA
GAGACTCCCATGTCCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTG
TTCATGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCC
AGCAAGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGG
ATGATCAATGGCTCTTCTGGGTTGGACCCTTCATCGGTGCAGCAATTGCG
GCTTTCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGG
TTCATTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCGACAAGTGGATT
ATCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGG
GAAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGT
GTGATTTGTGCTTTCAAGGAGTTGTAGGCAAAAAGTCTCTTAGACAATGA
GGGGGCTTGCTTTTTTGTAATCCCCTCTGTTGTTTTCAAGCACTTTCCTT
AGAATTCACTTCTTCAATGTTTCTGTCTCTTTCTACTTTGTATTATTTTC
TCCGNATGTGATTATTATTATTATTGTTGTGCTTTTAGGAAAAAAAAAAA
TATTACCTATGTTGTCATTTTAACAANCCAACCACCCACCTACACCTCTC
CATCACAACTATAACCACCTTTTACACACCTTTACCACACACCACTCTTC
TCTTCCCCCCCTTCCCACCCTTTACCTCTCAAGAGGGGGCCCCCTCTAAG
AGACCCCTCTCCC
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