EY755989

Overview
NameEY755989
Unique NameEY755989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2179 contig Csv1_Contig2179:361..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14
Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 345
            SP+LRG+EVG+AHG+ L+GP+VK GPLR++++            +++ + CL  YG+ SF +G  S+             D L+T++GW++         +     A+FLL
Sbjct:   43 SPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_SYNE7 (Photosystem I reaction center subunit XI OS=Synechococcus elongatus (strain PCC 7942) GN=psaL PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14
Identity = 45/126 (35.71%), Postives = 63/126 (50.00%), Query Frame = 1
Query:   25 RGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK*KYVTSTLW 402
            RG+E+G+AHGFLL GPF   GPLRNTE             VVIL++CL++YG A      PS A     T     P +L T +GW++         + G   A+F  Y+ + PY      + + +W
Sbjct:   46 RGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTT--PNPPQELFTKEGWSEFTSGFILGGLGG---AFFAFYLASTPYVQPLVKIAAGVW 163          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_ODOSI (Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGW 279
            +PLLRG+E+GLAHG+ L+GPFVK GPLRN++I            ++IL++ LTIYG+A+F +G+ +           +  + LQT   W
Sbjct:   42 TPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQTKKAW 119          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_CYAP4 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psaL PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 345
            SP+LRG+E+G+AHG+ L+GP+VK GPLR++++            ++I + CL  YGI SF + E +  P             L TA+GW++           G   A+ LL
Sbjct:   47 SPILRGLEIGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILIATACLAAYGIVSFQKEEAAANP-------------LNTAEGWSQFTAGFFVGATGGAFVAFTLL 144          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP6 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaL PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.824e-13
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 1
Query:   25 RGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK*KYVTSTLW 402
            RG+E+G+AHGFLL GP    GPLRNTE             VVIL++CL++YG A      PS A     T     P +L T +GW++         + G   A+F  Y+ + PY      + + +W
Sbjct:   45 RGLEIGMAHGFLLYGPLSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTT--PNPPQELFTKEGWSEFTSGFILGGLGG---AFFAFYLASTPYVQPLVKIAAGVW 162          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.824e-13
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 345
            SP LRG+E+G+AHG+ L+GPFV+ GPLRNT+I            +VIL++ + +YG  SF+                 +   L++ DGW +         + G  +AY LL
Sbjct:   42 SPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLESVDGWRQLASGFLLGAVGGAGFAYLLL 136          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_SYNEN (Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 345
            SP+L G+EVG+AHG+ L+GP+VK GPLR++++            +++ + CL  YG+ SF +G  S+             D L+T++GW++         +     A+FLL
Sbjct:   43 SPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_SYNY3 (Photosystem I reaction center subunit XI OS=Synechocystis sp. (strain PCC 6803) GN=psaL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.817e-13
Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 360
            SP+LRG+EVG+AHG+ L+GP+   GPLR++E             +++ +  L+ YG+ +F              G +   D LQTADGW++         + G   AYFLL  L++
Sbjct:   45 SPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLLENLSV 147          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_PHATR (Photosystem I reaction center subunit XI OS=Phaeodactylum tricornutum GN=psaL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGW 279
            +PLLRG+E+GLAHG+ L+GPFVK GPLR++EI            +VIL++ LTIYG+A+F  G+  T        +    + LQT   W
Sbjct:   42 TPLLRGLEIGLAHGYFLMGPFVKLGPLRDSEIGLLAGFLSTVGLIVILTLGLTIYGVAAF--GQEKT--------QSSNENDLQTKKAW 120          
BLAST of EY755989 vs. ExPASy Swiss-Prot
Match: PSAL_MICAN (Photosystem I reaction center subunit XI OS=Microcystis aeruginosa (strain NIES-843) GN=psaL PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 1
Query:   13 SPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 345
            +P+LRG+EVG+AHG+ L GP+V  GPLR++E             V++ + CL  YG+ SF              G+    D L++A+GW++         + G   AYFLL
Sbjct:   47 APILRGLEVGMAHGYFLGGPWVVLGPLRDSEYANIGGLIPALAMVLLATGCLASYGLVSFQ-------------GKAASNDPLKSAEGWSQFAAGFFIGGMGGAFVAYFLL 144          
The following BLAST results are available for this feature:
BLAST of EY755989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PSAL_THEEB5.690e-1433.33Photosystem I reaction center subunit XI OS=Thermo... [more]
PSAL_SYNE75.690e-1435.71Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_ODOSI9.706e-1441.57Photosystem I reaction center subunit XI OS=Odonte... [more]
PSAL_CYAP42.162e-1334.23Photosystem I reaction center subunit XI OS=Cyanot... [more]
PSAL_SYNP62.824e-1334.92Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_CYAME2.824e-1334.23Photosystem I reaction center subunit XI OS=Cyanid... [more]
PSAL_SYNEN3.688e-1332.43Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_SYNY34.817e-1333.62Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_PHATR6.291e-1343.82Photosystem I reaction center subunit XI OS=Phaeod... [more]
PSAL_MICAN5.326e-1234.23Photosystem I reaction center subunit XI OS=Microc... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-C11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755989 ID=EY755989; Name=EY755989; organism=Citrus sinensis; type=EST; length=516bp
CCACGCGTCCGCAGCCCACTACTGAGAGGAGTAGAGGTGGGGTTGGCCCA
TGGATTCCTCCTTGTGGGTCCATTTGTTAAGGCAGGGCCATTGAGAAACA
CAGAAATAGCAGGACCAGCAGGGTCATTGGCAGCTGGTGGCCTTGTTGTG
ATCCTCAGCATTTGCTTGACAATCTATGGAATTGCTTCATTCAGTGAAGG
AGAGCCATCCACTGCTCCAGGCTTAACATTGACCGGAAGGAAGAAGGAGC
CTGATCAGTTGCAAACAGCTGATGGGTGGGCTAAGTTCACTGGAGGATTC
TTCTTTGGTGGAATTTCTGGTGTCATTTGGGCTTATTTCCTGCTTTACGT
TCTTAACCTTCCCTACTTCGTTAAATAGAAATATGTAACATCTACTCTTT
GGTTTTAAGATCCCATGTATCTCAATTTGCTACTCTGTAAATCTACCTGT
TTGGGATGTTTATTGCAAATGAAACTTGCTTCAGTTACTGAAAAAAAAAA
AAAAAAAAAAAAAAAA
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