EY755965

Overview
NameEY755965
Unique NameEY755965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5506 contig Csv1_Contig5506:35..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_RICFE (Fumarate hydratase class II OS=Rickettsia felis GN=fumC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.785e-28
Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I+ L  +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEFD +VVPEKMIG
Sbjct:  397 RINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFDKIVVPEKMIG 461

HSP 2 Score: 56.225 bits (134), Expect = 2.785e-28
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            + GSNGH ELNVFKP+I   +L S+ LL D+  SF  +CV+G++ N  R
Sbjct:  349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_HELPJ (Fumarate hydratase class II OS=Helicobacter pylori J99 GN=fumC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.720e-28
Identity = 42/66 (63.64%), Postives = 55/66 (83.33%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            KI   LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD  VVPEKMIGP
Sbjct:  396 KIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDQFVVPEKMIGP 461

HSP 2 Score: 55.0694 bits (131), Expect = 4.720e-28
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +  S G+FELNVFKP+I    L SLRLL D+  SF  +C  GI+ N+E+
Sbjct:  348 IAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEK 396
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_PHOLL (Fumarate hydratase class II OS=Photorhabdus luminescens subsp. laumondii GN=fumC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.720e-28
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I++LL+ESLMLVT+LN  IGYD AA +AKKAHKEG TLK +A+KLG L   EFD  V PE M+G
Sbjct:  397 RITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKQSAMKLGYLTEAEFDEWVRPEDMVG 461

HSP 2 Score: 60.4622 bits (145), Expect = 4.720e-28
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GG++G+FELNVF+PM+ +  L S+RLL D   SF ++C  GI+ NR+R
Sbjct:  349 IGGASGNFELNVFRPMVINNFLQSVRLLADGMRSFNEHCAVGIEPNRDR 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_SALTY (Fumarate hydratase class II OS=Salmonella typhimurium GN=fumC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.297e-27
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I++LL+ESLMLVT+LN  IGYD AA +AKKAHKEG TLK +A+ LG L+ EEFD  V PE M+G
Sbjct:  397 RITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDEEFDAWVRPELMVG 461

HSP 2 Score: 60.077 bits (144), Expect = 2.297e-27
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GG++G+FELNV++PM+    L ++RLL D   SF K+C  GI+ NRER
Sbjct:  349 MGGASGNFELNVYRPMVIHNFLQTVRLLADGMESFNKHCASGIEPNRER 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_RICBR (Fumarate hydratase class II OS=Rickettsia bellii (strain RML369-C) GN=fumC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.892e-27
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 346
            I+ L  +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEF+ +VVPEKM+  S
Sbjct:  398 INDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFNKIVVPEKMVRQS 463

HSP 2 Score: 57.3806 bits (137), Expect = 3.892e-27
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQAN 140
            + GSNGH ELNVFKP+I   +L S+ LL DA+ SF  +CV GI+ N
Sbjct:  349 IAGSNGHLELNVFKPVIIYNILQSIELLSDAANSFVTHCVDGIEPN 394
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_SALTI (Fumarate hydratase class II OS=Salmonella typhi GN=fumC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.584e-27
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I++LL+ESLMLVT+LN  IGYD AA +AKKAHKEG TLK +A+ LG L+  EFD  V PE M+G
Sbjct:  397 RITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDAEFDAWVRPELMVG 461

HSP 2 Score: 60.4622 bits (145), Expect = 8.584e-27
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GG++G+FELNV++PM+    L ++RLL D  ASF ++C  GI+ NRER
Sbjct:  349 MGGASGNFELNVYRPMVIHNFLQTVRLLADGMASFNQHCASGIEPNRER 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_RICPR (Fumarate hydratase class II OS=Rickettsia prowazekii GN=fumC PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.586e-27
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 337
            +I+ L  +SLMLVT LNP IGYDNAA +AK+AHK G TLK+AA KL  L+ EEFD +VVPEKMI
Sbjct:  397 RINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMI 460

HSP 2 Score: 56.225 bits (134), Expect = 8.586e-27
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            + GSNGH ELNVFKP+I   +L S+ LL D+  SF  +CV+G++ N  R
Sbjct:  349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_RICCN (Fumarate hydratase class II OS=Rickettsia conorii GN=fumC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.118e-26
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 346
            +I+ L  +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+  +FD +VVPEKM+  S
Sbjct:  397 RINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEAKFDKIVVPEKMVSQS 463

HSP 2 Score: 56.225 bits (134), Expect = 1.118e-26
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            + GSNGH ELNVFKP+I   +L S+ LL D+  SF  +CV+G++ N  R
Sbjct:  349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_RICTY (Fumarate hydratase class II OS=Rickettsia typhi GN=fumC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.118e-26
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 337
            +I+ L  +SLMLVT LNP IGYDNAA +AK+A+K G TLK+AA KL  L+ EEFD +V+PEKMI
Sbjct:  397 RINALRDKSLMLVTVLNPHIGYDNAAKIAKEAYKYGITLKEAAKKLNFLSEEEFDKIVIPEKMI 460

HSP 2 Score: 58.5362 bits (140), Expect = 1.118e-26
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            + GSNGH ELNVFKP+I   +L S+ LL D+  SF  +CV+G++ N ER
Sbjct:  349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIER 397
[Close]
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_YERPE (Fumarate hydratase class II OS=Yersinia pestis GN=fumC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.455e-26
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 2 
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I++LL+ESLMLVT+LN  IGYD AA +AKKAHKEG TLK AA+ LG L   EFD  V PE M+G
Sbjct:  397 RITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAAMALGYLTDAEFDEWVRPEDMVG 461

HSP 2 Score: 57.3806 bits (137), Expect = 1.455e-26
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 3 
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GG++G+FELNVF+P++    L S+RLL D    F ++C  GI+ NR+R
Sbjct:  349 IGGASGNFELNVFRPLVIHNFLQSVRLLADGMRGFNEHCALGIEPNRDR 397
The following BLAST results are available for this feature:
BLAST of EY755965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
FUMC_RICFE2.785e-2867.69Fumarate hydratase class II OS=Rickettsia felis GN... [more]
FUMC_HELPJ4.720e-2863.64Fumarate hydratase class II OS=Helicobacter pylori... [more]
FUMC_PHOLL4.720e-2864.62Fumarate hydratase class II OS=Photorhabdus lumine... [more]
FUMC_SALTY2.297e-2764.62Fumarate hydratase class II OS=Salmonella typhimur... [more]
FUMC_RICBR3.892e-2763.64Fumarate hydratase class II OS=Rickettsia bellii (... [more]
FUMC_SALTI8.584e-2763.08Fumarate hydratase class II OS=Salmonella typhi GN... [more]
FUMC_RICPR8.586e-2767.19Fumarate hydratase class II OS=Rickettsia prowazek... [more]
FUMC_RICCN1.118e-2661.19Fumarate hydratase class II OS=Rickettsia conorii ... [more]
FUMC_RICTY1.118e-2664.06Fumarate hydratase class II OS=Rickettsia typhi GN... [more]
FUMC_YERPE1.455e-2664.62Fumarate hydratase class II OS=Yersinia pestis GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755965 ID=EY755965; Name=EY755965; organism=Citrus sinensis; type=EST; length=647bp
CAGTGGGTGGATCAAATGGCCATTTTGAACTAAATGTATTCAAGCCAATG
ATTGCTAGTGGTCTCCTACATTCACTGAGATTGCTGGGAGATGCATCTGC
TTCTTTTGAGAAGAACTGTGTGAGAGGAATTCAAGCTAATAGGGAAAGAT
TTCCAAATTGCTGCACGAGTCATTGATGCTTGTCACATCCTTGAATCCTA
AAATTGGTTATGACAATGCTGCGGCAGTTGCCAAGAAGGCTCACAAGGAG
GGAACTACACTTAAGGATGCTGCATTGAAACTCGGAGTACTCAATAGTGA
AGAATTTGATAATCTTGTGGTACCTGAGAAAATGATTGGCCCATCCGACT
AACCAGCTTATGTGGGTTAAACTCCTGGGATTTGCTTTTGGCTTTTGTAT
CATTTTGCGGGATATCTGTTTCTGCGCCGTTTCTCTCCCTCAAGGCCTCA
ACTGAATCACTTGATAGGGATCCAAATAGTGATTTTGCTTTTATTTAAAA
AAACAAAGAAAGGGGCAACCAAAAAAAAACTATATTCTTGAGGNTTTCCC
AGGAGGAGGCTTCGGTGATATGTCATTTCACGTGGTGACAGAATAGCGAT
TGGTAGGCCCACAAAGGAAGACCTCCCTCATTTTTTGTGCGACAGTG
back to top