EY755965

Overview
NameEY755965
Unique NameEY755965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5506 contig Csv1_Contig5506:35..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_BACHD (Fumarate hydratase class II OS=Bacillus halodurans GN=fumC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.326e-23
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            I K L+ESLMLVT+LNP IGY+NAA +AKKAH EG TLK+AA++ G+L  EEF+ +V P KM+ P
Sbjct:  396 IKKHLNESLMLVTALNPHIGYENAAKIAKKAHAEGLTLKEAAMQSGLLTEEEFEKMVDPAKMVHP 460          

HSP 2 Score: 44.669 bits (104), Expect = 2.326e-23
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 3
Query:   12 SNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQAN 140
            S G+FELNVFKP+I    L S  LL D   +F   C+ G++AN
Sbjct:  350 SQGNFELNVFKPVIIYNFLQSTTLLTDGLRTFHDKCLIGLEAN 392          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC2_PSEAE (Fumarate hydratase class II 2 OS=Pseudomonas aeruginosa GN=fumC2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.027e-23
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 337
            +++ LL   LMLVT+LNP IGYD AA +AKKA+ EGTTL+ AAL+LG L+  +FD  V PE+M+
Sbjct:  395 RMADLLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLRAAALQLGYLDEAQFDEWVRPEQML 458          

HSP 2 Score: 53.5286 bits (127), Expect = 3.027e-23
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 3
Query:   12 SNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            S GH +LNVFKP+I   LL S+RLL D   +F K+CV G++ + +R
Sbjct:  350 SQGHLQLNVFKPVIVYNLLESIRLLADGCRNFNKHCVAGLEPDAQR 395          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_CAUCR (Fumarate hydratase class II OS=Caulobacter crescentus GN=fumC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.667e-23
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            I K +  SLMLVT+LN K+GYD  A +AK AHK GTTL++ A+  G L +EEF+  V PEKMI P
Sbjct:  398 IKKGVENSLMLVTALNGKLGYDACAKIAKTAHKNGTTLREEAVGGGYLTNEEFEQYVRPEKMISP 462          

HSP 2 Score: 55.0694 bits (131), Expect = 6.667e-23
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQ 134
            GS GHFELNVF P++A   L S+RL+ DA+ SF  NCV GI+
Sbjct:  351 GSQGHFELNVFNPVMAYNFLQSVRLVADAAISFTDNCVVGIE 392          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_OCEIH (Fumarate hydratase class II OS=Oceanobacillus iheyensis GN=fumC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.668e-23
Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            +I K L++SLMLVT+LNP IGY+NAA +AKKA  + +TLK+ A++LG+L  E+FD  V PE+M  P
Sbjct:  395 QIEKNLNDSLMLVTALNPHIGYENAAKIAKKAFADNSTLKETAVELGLLTEEQFDEYVNPEEMTYP 460          

HSP 2 Score: 51.6026 bits (122), Expect = 6.668e-23
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 3
Query:   12 SNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            S G+FELNVFKP+IA   L S +LL D+  SF++ C  GI+ N E+
Sbjct:  350 SQGNFELNVFKPVIAYNFLQSSQLLADSIISFDERCAVGIEPNHEQ 395          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_NITEU (Fumarate hydratase class II OS=Nitrosomonas europaea GN=fumC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.676e-23
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 334
            +I + L ESLMLVT+LNP IGYD AA +AKKAH E  TLK+AA++LG + +E+FD  V P+KM
Sbjct:  397 RIKQHLQESLMLVTALNPHIGYDKAAEIAKKAHHEMLTLKEAAIRLGYVTAEQFDVWVDPQKM 459          

HSP 2 Score: 51.2174 bits (121), Expect = 8.676e-23
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GG+ G+FELN  KP+I    L S RLL D + SF  +C  GI AN  R
Sbjct:  349 LGGAMGNFELNTMKPLIIHNFLQSTRLLADGAESFNTHCAAGITANTVR 397          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_STAES (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fumC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-22
Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            I+  L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G +   +F+  + PE M+ P
Sbjct:  396 INNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIESGYVTESQFEEWIKPEDMVDP 460          

HSP 2 Score: 51.6026 bits (122), Expect = 1.129e-22
Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERFPN 158
            +  S G+FELNVFKP+I    L S+ LL D   +F KNC  GIQ   E   N
Sbjct:  347 IASSQGNFELNVFKPVIMHNTLQSIYLLADGMNTFNKNCAIGIQPIEENINN 398          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-22
Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            I+  L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G +   +F+  + PE M+ P
Sbjct:  396 INNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIESGYVTESQFEEWIKPEDMVDP 460          

HSP 2 Score: 51.6026 bits (122), Expect = 1.129e-22
Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERFPN 158
            +  S G+FELNVFKP+I    L S+ LL D   +F KNC  GIQ   E   N
Sbjct:  347 IASSQGNFELNVFKPVIMHNTLQSIYLLADGMNTFNKNCAIGIQPIEENINN 398          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_PSEPK (Fumarate hydratase class II OS=Pseudomonas putida (strain KT2440) GN=fumC-2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.469e-22
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  161 LHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            L   LMLVT+LNP IGYD AA +AKKA+ EGTTL++AAL L  L +E+FD  V PE M+ P
Sbjct:  400 LERGLMLVTALNPHIGYDKAAEIAKKAYSEGTTLREAALALKYLTNEQFDQWVRPENMLAP 460          

HSP 2 Score: 51.2174 bits (121), Expect = 1.469e-22
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 3
Query:   12 SNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            S GH +LNVFKP+I   LL S+ LL D   +F+++CV GI+ + E+
Sbjct:  350 SQGHLQLNVFKPVIIHNLLQSIELLADGCRNFQQHCVAGIEPDAEQ 395          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_DEIRA (Fumarate hydratase class II OS=Deinococcus radiodurans GN=fumC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.234e-22
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 325
            KI + L ++LM VT+LN  IGYD AAA+AKKAHKEGT+LKDAAL LG +  +EF   VVP
Sbjct:  399 KIKENLDKNLMQVTALNRHIGYDKAAAIAKKAHKEGTSLKDAALALGYVTEDEFAQWVVP 458          

HSP 2 Score: 51.6026 bits (122), Expect = 3.234e-22
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            GS G+F+LNVFKP++   +L S+RL+ DA  +F  +C  GIQ N  +
Sbjct:  353 GSQGNFQLNVFKPVMVHAVLESIRLISDACLAFNDHCAVGIQPNEAK 399          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_STAHJ (Fumarate hydratase class II OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fumC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.208e-22
Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            I+  L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G +  E+F+  + PE M+ P
Sbjct:  396 INNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQSGHVTEEQFEEWIKPEDMVDP 460          

HSP 2 Score: 48.521 bits (114), Expect = 4.208e-22
Identity = 23/52 (44.23%), Postives = 29/52 (55.77%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERFPN 158
            +  S G+FELNVFKP+I    L S+ LL D   +F  NC  GI+   E   N
Sbjct:  347 IASSQGNFELNVFKPVILHNTLQSIYLLADGMQTFNDNCAVGIEPIEENINN 398          
The following BLAST results are available for this feature:
BLAST of EY755965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
FUMC_BACHD2.326e-2363.08Fumarate hydratase class II OS=Bacillus halodurans... [more]
FUMC2_PSEAE3.027e-2357.81Fumarate hydratase class II 2 OS=Pseudomonas aerug... [more]
FUMC_CAUCR6.667e-2356.92Fumarate hydratase class II OS=Caulobacter crescen... [more]
FUMC_OCEIH6.668e-2356.06Fumarate hydratase class II OS=Oceanobacillus ihey... [more]
FUMC_NITEU8.676e-2360.32Fumarate hydratase class II OS=Nitrosomonas europa... [more]
FUMC_STAES1.129e-2252.31Fumarate hydratase class II OS=Staphylococcus epid... [more]
FUMC_STAEQ1.129e-2252.31Fumarate hydratase class II OS=Staphylococcus epid... [more]
FUMC_PSEPK1.469e-2260.66Fumarate hydratase class II OS=Pseudomonas putida ... [more]
FUMC_DEIRA3.234e-2263.33Fumarate hydratase class II OS=Deinococcus radiodu... [more]
FUMC_STAHJ4.208e-2253.85Fumarate hydratase class II OS=Staphylococcus haem... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755965 ID=EY755965; Name=EY755965; organism=Citrus sinensis; type=EST; length=647bp
CAGTGGGTGGATCAAATGGCCATTTTGAACTAAATGTATTCAAGCCAATG
ATTGCTAGTGGTCTCCTACATTCACTGAGATTGCTGGGAGATGCATCTGC
TTCTTTTGAGAAGAACTGTGTGAGAGGAATTCAAGCTAATAGGGAAAGAT
TTCCAAATTGCTGCACGAGTCATTGATGCTTGTCACATCCTTGAATCCTA
AAATTGGTTATGACAATGCTGCGGCAGTTGCCAAGAAGGCTCACAAGGAG
GGAACTACACTTAAGGATGCTGCATTGAAACTCGGAGTACTCAATAGTGA
AGAATTTGATAATCTTGTGGTACCTGAGAAAATGATTGGCCCATCCGACT
AACCAGCTTATGTGGGTTAAACTCCTGGGATTTGCTTTTGGCTTTTGTAT
CATTTTGCGGGATATCTGTTTCTGCGCCGTTTCTCTCCCTCAAGGCCTCA
ACTGAATCACTTGATAGGGATCCAAATAGTGATTTTGCTTTTATTTAAAA
AAACAAAGAAAGGGGCAACCAAAAAAAAACTATATTCTTGAGGNTTTCCC
AGGAGGAGGCTTCGGTGATATGTCATTTCACGTGGTGACAGAATAGCGAT
TGGTAGGCCCACAAAGGAAGACCTCCCTCATTTTTTGTGCGACAGTG
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