EY755965

Overview
NameEY755965
Unique NameEY755965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5506 contig Csv1_Contig5506:35..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_METAC (Fumarate hydratase class II OS=Methanosarcina acetivorans GN=fumC PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.676e-20
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            +I K +  SLMLVT+L+P IGYD A+A+ ++A  E TTL++AA+K G +++E+FD +V P+KM+G
Sbjct:  409 RIDKFVGTSLMLVTALSPVIGYDKASAIVQRALDENTTLREAAVKGGFISAEDFDRIVDPKKMVG 473          

HSP 2 Score: 47.3654 bits (111), Expect = 3.676e-20
Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            GS G+FELN   P+I + +LHS R LGDA   F +  + GI  +R R
Sbjct:  363 GSQGNFELNAMCPIIINNVLHSARTLGDACVKFREYGINGIMLDRSR 409          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_PROMM (Fumarate hydratase class II OS=Prochlorococcus marinus (strain MIT 9313) GN=fumC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.780e-19
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 334
            KI   L +SLMLVT+L P+IGYD A+ +A  AH++G +L++AALKLG ++ E+FD +V P  M
Sbjct:  399 KIQHDLEQSLMLVTALAPEIGYDKASEIAHLAHEKGFSLREAALKLGYVSKEDFDRIVNPALM 461          

HSP 2 Score: 49.2914 bits (116), Expect = 1.780e-19
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANR 143
            + G +GH ++NV+KP+I   LLHS+ LL DA   +    V+GI+ NR
Sbjct:  351 MAGGSGHLQMNVYKPLIGFNLLHSIELLHDACRKYRLAMVQGIEPNR 397          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_SYNPX (Fumarate hydratase class II OS=Synechococcus sp. (strain WH8102) GN=fumC PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.781e-19
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            +I+  +  SLMLVT+L P+IGY+ A A+A+ AH++G TL++AA++ G +  E FD L+ P  M  P
Sbjct:  398 RIAFYVERSLMLVTALTPEIGYEKACAIAQHAHRDGLTLREAAMQSGAITDERFDQLIDPAAMASP 463          

HSP 2 Score: 48.9062 bits (115), Expect = 1.781e-19
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            G+ GH ++NV+KP+I   L+  +RLL DA   F  N + G++A+R+R
Sbjct:  352 GAGGHLQMNVYKPLIGYNLIEGIRLLQDACRCFRLNLLTGMEADRDR 398          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_LISMO (Fumarate hydratase class II OS=Listeria monocytogenes GN=fumC PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.013e-19
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 334
            I   +++SLMLVT+LNP IGY+ AA +AK A  E TTLK+AA+K G +  +EFD  + P KM
Sbjct:  391 IETKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWINPLKM 452          

HSP 2 Score: 50.447 bits (119), Expect = 3.013e-19
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 146
            V  S G+FELNV+KP+I    L S++LL D+  SF  +C+ G+ AN +
Sbjct:  342 VAASQGNFELNVYKPVIIFNFLESIKLLADSMRSFRVHCLEGLTANEK 389          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_LISMF (Fumarate hydratase class II OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fumC PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.616e-19
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 334
            I   +++SLMLVT+LNP IGY+ AA +AK A  E TTLK+AA+K G +  ++FD  + P KM
Sbjct:  391 IETKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKQFDLWIDPLKM 452          

HSP 2 Score: 50.0618 bits (118), Expect = 8.616e-19
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 146
            V  S G+FELNV+KP+I    L S++LL D+  SF  +C+ G+ AN +
Sbjct:  342 VAASQGNFELNVYKPVIIFNFLESVKLLSDSMRSFRLHCLEGLTANEK 389          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_LISIN (Fumarate hydratase class II OS=Listeria innocua GN=fumC PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.457e-18
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  149 ISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 334
            I   +++SLMLVT+LNP IGY+ AA +AK A  E TTLK+AA+K G +  +EFD  + P KM
Sbjct:  391 IEAKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWIDPLKM 452          

HSP 2 Score: 48.1358 bits (113), Expect = 1.457e-18
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQAN 140
            +  S G+FELNV+KP+I    L S+ LL D+  SF  +C+ G+ AN
Sbjct:  342 IAASQGNFELNVYKPVIIFNFLESITLLSDSMRSFRIHCLEGLTAN 387          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIN (Fumarate hydratase class II OS=Leptospira interrogans GN=fumC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.618e-18
Identity = 50/93 (53.76%), Postives = 67/93 (72.04%), Query Frame = 2
Query:   80 IAGRCICFF*EELCER----NSS**GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 346
            ++  C+ F  EE C R    N     K+++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD  V+PEKMI PS
Sbjct:  375 LSDSCVSF--EEHCARGIIPNKE---KLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIC (Fumarate hydratase class II OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=fumC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.618e-18
Identity = 50/93 (53.76%), Postives = 67/93 (72.04%), Query Frame = 2
Query:   80 IAGRCICFF*EELCER----NSS**GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 346
            ++  C+ F  EE C R    N     K+++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD  V+PEKMI PS
Sbjct:  375 LSDSCVSF--EEHCARGIIPNKE---KLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_CHLPN (Fumarate hydratase class II OS=Chlamydia pneumoniae GN=fumC PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.463e-18
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 2
Query:  161 LHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            ++ SLMLVT+L P +GYD  +  A KA  E  +LK+A L LG L+ +EFD LVVPE M+G
Sbjct:  399 INNSLMLVTALAPVLGYDKCSKAALKAFHESISLKEACLALGYLSEKEFDRLVVPENMVG 458          

HSP 2 Score: 46.9802 bits (110), Expect = 2.463e-18
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GGS G+FELNV KP+I    L S+ LL +   +F +  V+G++ N+ R
Sbjct:  346 IGGSRGNFELNVMKPVIIYNFLQSVDLLSEGMRAFSEFFVKGLKVNKAR 394          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.189e-17
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            KI   L  SLML+TSL P IGY+ A+ +A+ AH++  TLK+A   LG LN ++FD +V P+ M G
Sbjct:  398 KIQNSLQNSLMLITSLTPIIGYEKASKIAQCAHEKDITLKEATKLLGYLNEDDFDRIVNPQSMTG 462          

HSP 2 Score: 44.2838 bits (103), Expect = 1.189e-17
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERFPN 158
            + GS GH ++N +KP+IA  LL S+ LL  A  S     + GI+ N E+  N
Sbjct:  350 MAGSGGHLQMNSYKPLIAFNLLESIDLLSSACKSSRILMIEGIEPNLEKIQN 401          
The following BLAST results are available for this feature:
BLAST of EY755965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
FUMC_METAC3.676e-2050.77Fumarate hydratase class II OS=Methanosarcina acet... [more]
FUMC_PROMM1.780e-1952.38Fumarate hydratase class II OS=Prochlorococcus mar... [more]
FUMC_SYNPX1.781e-1945.45Fumarate hydratase class II OS=Synechococcus sp. (... [more]
FUMC_LISMO3.013e-1953.23Fumarate hydratase class II OS=Listeria monocytoge... [more]
FUMC_LISMF8.616e-1951.61Fumarate hydratase class II OS=Listeria monocytoge... [more]
FUMC_LISIN1.457e-1853.23Fumarate hydratase class II OS=Listeria innocua GN... [more]
FUMC_LEPIN1.618e-1853.76Fumarate hydratase class II OS=Leptospira interrog... [more]
FUMC_LEPIC1.618e-1853.76Fumarate hydratase class II OS=Leptospira interrog... [more]
FUMC_CHLPN2.463e-1853.33Fumarate hydratase class II OS=Chlamydia pneumonia... [more]
FUMC_PROMA1.189e-1749.23Fumarate hydratase class II OS=Prochlorococcus mar... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755965 ID=EY755965; Name=EY755965; organism=Citrus sinensis; type=EST; length=647bp
CAGTGGGTGGATCAAATGGCCATTTTGAACTAAATGTATTCAAGCCAATG
ATTGCTAGTGGTCTCCTACATTCACTGAGATTGCTGGGAGATGCATCTGC
TTCTTTTGAGAAGAACTGTGTGAGAGGAATTCAAGCTAATAGGGAAAGAT
TTCCAAATTGCTGCACGAGTCATTGATGCTTGTCACATCCTTGAATCCTA
AAATTGGTTATGACAATGCTGCGGCAGTTGCCAAGAAGGCTCACAAGGAG
GGAACTACACTTAAGGATGCTGCATTGAAACTCGGAGTACTCAATAGTGA
AGAATTTGATAATCTTGTGGTACCTGAGAAAATGATTGGCCCATCCGACT
AACCAGCTTATGTGGGTTAAACTCCTGGGATTTGCTTTTGGCTTTTGTAT
CATTTTGCGGGATATCTGTTTCTGCGCCGTTTCTCTCCCTCAAGGCCTCA
ACTGAATCACTTGATAGGGATCCAAATAGTGATTTTGCTTTTATTTAAAA
AAACAAAGAAAGGGGCAACCAAAAAAAAACTATATTCTTGAGGNTTTCCC
AGGAGGAGGCTTCGGTGATATGTCATTTCACGTGGTGACAGAATAGCGAT
TGGTAGGCCCACAAAGGAAGACCTCCCTCATTTTTTGTGCGACAGTG
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