EY755705

Overview
NameEY755705
Unique NameEY755705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9921 contig Csv1_Contig9921:12..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.488e-36
Identity = 83/159 (52.20%), Postives = 111/159 (69.81%), Query Frame = 3
Query:   63 MSDEEH---HFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLL-TETGNTKDDLRLPTDENLLSQIKDGFAEGK-DLVVTVMSSMGEEQICALK 524
            MSD+ H   HF +  D+GA+ TFP+Q   +RKN +++IK RPCK+VE+STSKTGKHGHAK H V IDIF  KKLEDI PS+HN D P V R +Y L+ I +DG+ SL+  E+   KDDL+LP D  L  QI+D + + +  ++V V+S++GEE I   K
Sbjct:    1 MSDDHHDDEHFHT-GDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWK 156          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 9.780e-36
Identity = 72/145 (49.66%), Postives = 107/145 (73.79%), Query Frame = 3
Query:   90 SKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 524
            ++A +GAS TFP Q   +RKNG++VIK  PCK+V++STSKTGKHGHAK +   IDIF GKK E+I PS+HN D P+V+R +Y ++D+ +DG++SLL   G  K+DL LP D+ +  +I     EGK+ +V+V+S++G+E + ++K
Sbjct:   13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.663e-33
Identity = 77/156 (49.36%), Postives = 109/156 (69.87%), Query Frame = 3
Query:   72 EEHHFESK---ADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLL-TETGNTKDDLRLPTDENLLSQIKDGFAEGK-DLVVTVMSSMGEEQICALK 524
            E+HH E +   A++GA+ TFP+Q   +RKN +++I+ RPCK+VE+STSKTGKHGHAK H V IDIF  KKLEDI PS+HN D P V R +Y L+ I EDGF SL+  E+   KDDL++P + +L + I++   + +  ++V V+++ GEE I   K
Sbjct:    3 EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMP-EGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  117 TFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 524
            T P++AG I+   +IVI   PCKVVEV  SKTGKHG AK   VGI  F+G K   +VP+    + P + +   Q++    D  V L+     +  ++ +P +E + S++ +G      + V V   MG  +I  ++
Sbjct:    3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG------VEVEVWEVMGRHKIMRVR 131          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 3
Query:   99 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVG 248
            D GASKT P+Q   +RK G++V+K+RPCK+VE+STSKTGKHG AK H VG
Sbjct:    3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.984e-12
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  135 GTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 524
            G +++  YIVI   PC+VVEV+ +KTGKHG AK + + + IF G K   + P     + P + +   Q+I    D    +  ET  T  ++ +PT+E++ S+IK      KD  V     MG ++I  +K
Sbjct:    9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.984e-12
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  141 IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 527
            ++K  YI+I + PCK+VE +TS  GKHG AK   V + +F+GKK     P     D P + R   Q++    D    +  ET  T  +++ P DE L SQ++ G       +V  M + G+ +I  +K+
Sbjct:   13 LKKGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGDTVQLMDMETYET-FEVQKPEDEELASQLEPG------TMVEYMEAAGKRKIVGIKE 134          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 3
Query:  132 AGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISED 359
            AG I++  YI+I N PC+VVEV  SKTGKHG AK   VGI + +G K   +VP+    + P + +   Q+I IS D
Sbjct:    8 AGDIKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTAQVISISGD 83          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_KORCO (Translation initiation factor 5A OS=Korarchaeum cryptofilum (strain OPF8) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  132 AGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQI 512
            AG +RK  Y+++ + PC+V+EVS SK GKHG AK       IF+G +   I P+    + P V +   Q+I++  +    +  ET  T  +L LP D  L S++K G      + V    SMG+ +I
Sbjct:    8 AGDLRKGSYVILDDEPCEVLEVSKSKPGKHGSAKVRVEARGIFDGARRSKIFPADALVEIPIVDKKTAQVINVYGNVVQLMDLETYET-FELPLPEDPELASRLKSG------IEVEYWESMGKRKI 127          
BLAST of EY755705 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 39/114 (34.21%), Postives = 64/114 (56.14%), Query Frame = 3
Query:  111 SKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDG 452
            SKT+    G ++   +I+I   PCK+VE+S +KTGKHG AK H V I + +G K   + P     + P + +   Q++ I+ D    +  ET +T  ++ LP +E L S+++ G
Sbjct:    2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDSVQLMDMETYDT-FEVPLPEEEELKSRLEPG 113          
The following BLAST results are available for this feature:
BLAST of EY755705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IF5A2_CAEEL7.488e-3652.20Eukaryotic translation initiation factor 5A-2 OS=C... [more]
IF5A_DICDI9.780e-3649.66Eukaryotic translation initiation factor 5A OS=Dic... [more]
IF5A1_CAEEL2.663e-3349.36Eukaryotic translation initiation factor 5A-1 OS=C... [more]
IF5A_THEPD9.517e-1533.82Translation initiation factor 5A OS=Thermofilum pe... [more]
IF5A_SCHMA1.795e-1366.00Eukaryotic translation initiation factor 5A (Fragm... [more]
IF5A_METS51.984e-1233.85Translation initiation factor 5A OS=Metallosphaera... [more]
IF5A_METKA1.984e-1233.33Translation initiation factor 5A OS=Methanopyrus k... [more]
IF5A_CALMQ5.774e-1246.05Translation initiation factor 5A OS=Caldivirga maq... [more]
IF5A_KORCO1.286e-1134.65Translation initiation factor 5A OS=Korarchaeum cr... [more]
IF5A_IGNH41.680e-1134.21Translation initiation factor 5A OS=Ignicoccus hos... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-F04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755705 ID=EY755705; Name=EY755705; organism=Citrus sinensis; type=EST; length=816bp
AATTTATTGACACAAACACAGACAGAAGCAGAAGGAGAACAAGAAGAAGA
AAGAAAAAAACTATGTCGGACGAGGAGCACCACTTCGAATCGAAGGCTGA
TGCCGGTGCATCGAAGACTTTCCCTCAGCAAGCTGGAACCATCCGCAAGA
ATGGTTATATTGTCATCAAAAATCGTCCTTGCAAGGTTGTTGAAGTTTCC
ACTTCAAAGACTGGCAAGCATGGACATGCCAAGTGCCACTTTGTGGGAAT
TGATATATTTAATGGAAAGAAGCTTGAAGATATTGTGCCTTCCTCCCACA
ATTGTGATGCTCCCCATGTTACTCGCACTGACTATCAGCTGATTGATATA
TCCGAAGATGGTTTTGTGAGCCTTTTAACTGAAACCGGAAACACCAAGGA
TGATCTGAGGCTTCCTACCGATGAAAATCTGCTTAGCCAGATTAAAGATG
GGTTTGCTGAAGGAAAAGACCTTGTGGTGACCGTTATGTCGTCAATGGGA
GAGGAGCAGATCTGTGCCCTTAAGGACATTGGTCCTAAGAATTAACTATA
ATCCCATGGCATTAGCTTTGGCTGATAGCAGGAGAACTCTTTCTTATGTT
GCCAACATGGAGACTATCTACTATCCATGTCCACAACAAACTTCCATTAA
GATAGTATTTTGGCTGTGTATTAAAATATCGTCGTGCTTGTGATAAAGGA
AGTGGAAAGAAGCAGGTGTCGTCAATCTCCTGTTGAACGAAATTATGTTG
ACAGCATCTCGGACTTATTATATTTTACTATTTTATTAAAAAAAAAAANN
NNNNAAAANNNNNGGG
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